RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	MTF1	P14908	341 aa	Known RBP	4.99	□□□□□ -1.61
YEF1	YEL041W	PTP1	P25044	335 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	YKL071W	P36086	256 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	RTC2	P38279	296 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	SMF2	P38778	549 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	YIL152W	P40455	235 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	YRB1	P41920	201 aa	Known RBP	4.99	□□□□□ -1.61
YEF1	YEL041W	RIB4	P50861	169 aa	Predicted RBP	4.99	□□□□□ -1.61
YEF1	YEL041W	EBS1	Q03466	884 aa	Known RBP	4.99	□□□□□ -1.61
YEF1	YEL041W	ABP140	Q08641	628 aa	Known RBP	4.99	□□□□□ -1.61
YEF1	YEL041W	GPM2	Q12008	311 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	VIK1	Q12045	647 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	BTS1	Q12051	335 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	YOP1	Q12402	180 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	FMP16	Q12497	93 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	RGS2	Q99188	309 aa		4.99	□□□□□ -1.61
YEF1	YEL041W	CKI1	P20485	582 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	RRT12	P25381	491 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	ZIP1	P31111	875 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	YPS1	P32329	569 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	MNS1	P32906	549 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	TKL2	P33315	681 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	MAK5	P38112	773 aa	Predicted RBP	4.98	□□□□□ -1.61
YEF1	YEL041W	DSE1	P40077	573 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	SFH5	P47008	294 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	CPR7	P47103	393 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	HAM1	P47119	197 aa	Known RBP	4.98	□□□□□ -1.61
YEF1	YEL041W	RMR1	P53060	241 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	YMR181C	Q03231	154 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	MZM1	Q03429	123 aa	Predicted RBP	4.98	□□□□□ -1.61
YEF1	YEL041W	SMP3	Q04174	516 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	GIM5	Q04493	163 aa		4.98	□□□□□ -1.61
YEF1	YEL041W	RPS16A	P0CX51	143 aa	Known RBP	4.97	□□□□□ -1.61
YEF1	YEL041W	RPS16B	P0CX52	143 aa	Known RBP	4.97	□□□□□ -1.61
YEF1	YEL041W	MRPL8	P22353	238 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	PEX34	P25584	144 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	TOA2	P32774	122 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	GDH2	P33327	1092 aa	Known RBP	4.97	□□□□□ -1.61
YEF1	YEL041W	ASK1	P35734	292 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	YMR134W	P40207	237 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	BTT1	P40314	149 aa	Predicted RBP	4.97	□□□□□ -1.61
YEF1	YEL041W	YDL186W	P48568	277 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	BIO3	P50277	480 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	SLT2	Q00772	484 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	FMP42	Q04991	504 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	HRT3	Q12347	344 aa		4.97	□□□□□ -1.61
YEF1	YEL041W	SLY1	P22213	666 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	YEF1	P32622	495 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
YEF1	YEL041W	ARC40	P38328	384 aa	Known RBP	4.96	□□□□□ -1.62
YEF1	YEL041W	RRN9	P53437	365 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	CAF40	P53829	373 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	PRM6	Q04705	352 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	BCH1	Q05029	724 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	BSC6	Q08280	497 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	YOR338W	Q99326	363 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	AI5_BETA	Q9ZZX0	354 aa		4.96	□□□□□ -1.62
YEF1	YEL041W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
YEF1	YEL041W	ATR1	P13090	542 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	CIN8	P27895	1000 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	ATO2	P32907	282 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	VAM7	P32912	316 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	CSG2	P35206	410 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	YET1	P35723	206 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	RIB5	P38145	238 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	MTC4	P38335	694 aa	Known RBP	4.95	□□□□□ -1.62
YEF1	YEL041W	EGD2	P38879	174 aa	Known RBP	4.95	□□□□□ -1.62
YEF1	YEL041W	SUR2	P38992	349 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	FAA2	P39518	744 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	GLG2	P47011	380 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	RTT101	P47050	842 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	LOH1	P47055	219 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	YGR067C	P53243	804 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	SCW4	P53334	386 aa	Known RBP	4.95	□□□□□ -1.62
YEF1	YEL041W	YNL260C	P53846	198 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	HER2	Q03557	464 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	CCE1	Q03702	353 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	RTT103	Q05543	409 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	RAX1	Q08760	435 aa		4.95	□□□□□ -1.62
YEF1	YEL041W	TOR2	P32600	2474 aa	Known RBP	4.95	□□□□□ -1.62
YEF1	YEL041W	RPS3	P05750	240 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	MSF1	P08425	469 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	RPL20A	P0CX23	172 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	RPL20B	P0CX24	172 aa	Predicted RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	RPL18A	P0CX49	186 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	RPL18B	P0CX50	186 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	DEP1	P31385	405 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	RPC25	P35718	212 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	PMU1	P36069	295 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	AIM29	P36154	155 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	YIL169C	P40442	995 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	YLR283W	Q05867	314 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	CTS2	Q06350	511 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	SNX3	Q08826	162 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	YPQ1	Q12010	308 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	RRP12	Q12754	1228 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	CCH1	P50077	2039 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	MRS3	P10566	314 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	NHP6B	P11633	99 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	CAP2	P13517	287 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms