RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 RAB17Q9H0T7 212 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 SLITRK6Q9H5Y7 841 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 OLFML3Q9NRN5 406 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 CDK5RAP2Q96SN8 1893 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 IGLV3-22A0A075B6J6 115 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 BTNL10A8MVZ5 291 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 VPS41P49754 854 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 BFSP1Q12934 665 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 SNX1Q13596 522 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 SPRED3Q2MJR0 410 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 MOXD1Q6UVY6 613 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 PSMD1Q99460 953 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 GGT7Q9UJ14 662 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 STXBP5LQ9Y2K9 1186 aa15.77■□□□□ 0.12
SCARB2-221ENST00000640341 PRELPP51888 382 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 SLC29A2Q14542 456 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 DENND2CQ68D51 928 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 JAMLQ86YT9 394 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 CD248Q9HCU0 757 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 MLXIPLQ9NP71 852 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 GPRC5CQ9NQ84 441 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 FAM114A2Q9NRY5 505 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 IPO5O00410 1097 aaKnown RBP15.77■□□□□ 0.11
SCARB2-221ENST00000640341 TMEM253P0C7T8 217 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 CDR1P51861 262 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 MAP2K1Q02750 393 aaPredicted RBP15.77■□□□□ 0.11
SCARB2-221ENST00000640341 TRIP13Q15645 432 aaPredicted RBP15.77■□□□□ 0.11
SCARB2-221ENST00000640341 CEP55Q53EZ4 464 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 C2CD6Q53TS8 623 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 STXBP4Q6ZWJ1 553 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 CCDC13Q8IYE1 715 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 AZI2Q9H6S1 392 aa15.77■□□□□ 0.11
SCARB2-221ENST00000640341 TCRBV7S2A1N4TA0A589 114 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 DDX3YO15523 660 aaKnown RBP15.76■□□□□ 0.11
SCARB2-221ENST00000640341 SORBS3O60504 671 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 LRIG3Q6UXM1 1119 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 SLFN11Q7Z7L1 901 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 SLC30A5Q8TAD4 765 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 NACC1Q96RE7 527 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 AGPAT1Q99943 283 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 ERP44Q9BS26 406 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 SEMA4AQ9H3S1 761 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 CCDC172P0C7W6 258 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 BCRP11274 1271 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 NPR1P16066 1061 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 ALDH1B1P30837 517 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 HSPA1LP34931 641 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 IFI35P80217 286 aaPredicted RBP15.76■□□□□ 0.11
SCARB2-221ENST00000640341 SP4Q02446 784 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 ACTN3Q08043 901 aaPredicted RBP15.76■□□□□ 0.11
SCARB2-221ENST00000640341 PPP3CAQ08209 521 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 EPC2Q52LR7 807 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 PADI6Q6TGC4 694 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 CDAN1Q8IWY9 1227 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 CACNA2D3Q8IZS8 1091 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 SAAL1Q96ER3 474 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 SCLT1Q96NL6 688 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 POP1Q99575 1024 aaKnown RBP15.76■□□□□ 0.11
SCARB2-221ENST00000640341 KIFC3Q9BVG8 833 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 TCEAL9Q9UHQ7 104 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 SLC12A6Q9UHW9 1150 aa15.76■□□□□ 0.11
SCARB2-221ENST00000640341 CYP26A1O43174 497 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 SGPL1O95470 568 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 VIMP08670 466 aaKnown RBP15.75■□□□□ 0.11
SCARB2-221ENST00000640341 COMTP21964 271 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 PMS2P54278 862 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 BMT2Q1RMZ1 405 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 PODNQ7Z5L7 613 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 BORCS6Q96GS4 357 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 SEC16BQ96JE7 1060 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 GPR88Q9GZN0 384 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 RGS16O15492 202 aaPredicted RBP15.75■□□□□ 0.11
SCARB2-221ENST00000640341 PSMD10O75832 226 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 CHRNA5P30532 468 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 CETN1Q12798 172 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 BIRC3Q13489 604 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 LRRC14Q15048 493 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 GRIPAP1Q4V328 841 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 RASGEF1CQ8N431 466 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 DBR1Q9UK59 544 aaKnown RBP15.75■□□□□ 0.11
SCARB2-221ENST00000640341 ANKRD62A6NC57 917 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 CCDC169A6NNP5 214 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 CES2O00748 559 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 GJC1P36383 396 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 MIER3Q7Z3K6 550 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 NEK9Q8TD19 979 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 EPS8L3Q8TE67 593 aaKnown RBP15.75■□□□□ 0.11
SCARB2-221ENST00000640341 FAM118BQ9BPY3 351 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 GLIS2Q9BZE0 524 aaPredicted RBP15.75■□□□□ 0.11
SCARB2-221ENST00000640341 CD2APQ9Y5K6 639 aa15.75■□□□□ 0.11
SCARB2-221ENST00000640341 FOXO6A8MYZ6 492 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 SLC16A4O15374 487 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 TRAPPC3O43617 180 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 CPP00450 1065 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 CHN1P15882 459 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 PTENP60484 403 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 GKAP1Q5VSY0 366 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-221ENST00000640341 CCDC137Q6PK04 289 aaKnown RBP15.74■□□□□ 0.11
SCARB2-221ENST00000640341 UBL4BQ8N7F7 174 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms