RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 CPB2Q96IY4 423 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 MSLNLQ96KJ4 702 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 ZNF558Q96NG5 402 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 MTRQ99707 1265 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 APOL5Q9BWW9 433 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 TLE6Q9H808 572 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 POLD4Q9HCU8 107 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 AGPAT5Q9NUQ2 364 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 DNAJB4Q9UDY4 337 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 USO1O60763 962 aaKnown RBP18.26■□□□□ 0.51
COLCA2-207ENST00000639470 COL9A1P20849 921 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 TECP42680 631 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 RARRES1P49788 294 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 BCAR1P56945 870 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 ZP2Q05996 745 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 CAPSQ13938 189 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 LLGL2Q6P1M3 1020 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 POTEGQ6S5H5 508 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 AGMOQ6ZNB7 445 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 SLC39A11Q8N1S5 342 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 EFHBQ8N7U6 833 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 MRPS27Q92552 414 aaKnown RBP18.26■□□□□ 0.51
COLCA2-207ENST00000639470 TCF25Q9BQ70 676 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 EIF2AQ9BY44 585 aaKnown RBP18.26■□□□□ 0.51
COLCA2-207ENST00000639470 GBP3Q9H0R5 595 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 AAASQ9NRG9 546 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 DACT1Q9NYF0 836 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 CD207Q9UJ71 328 aa18.26■□□□□ 0.51
COLCA2-207ENST00000639470 B4GALT5O43286 388 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 DKC1O60832 514 aaKnown RBP eCLIP18.25■□□□□ 0.51
COLCA2-207ENST00000639470 ZC3H11AO75152 810 aaKnown RBP eCLIP18.25■□□□□ 0.51
COLCA2-207ENST00000639470 OFD1O75665 1012 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 LYPLA2O95372 231 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 RBM25P49756 843 aaKnown RBP18.25■□□□□ 0.51
COLCA2-207ENST00000639470 ECM1Q16610 540 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 OTUD6AQ7L8S5 288 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 CATSPER3Q86XQ3 398 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 ZNF280BQ86YH2 543 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 ZNF710Q8N1W2 664 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 FBXO18Q8NFZ0 1043 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 JPH2Q9BR39 696 aaPredicted RBP18.25■□□□□ 0.51
COLCA2-207ENST00000639470 LLPHQ9BRT6 129 aaKnown RBP18.25■□□□□ 0.51
COLCA2-207ENST00000639470 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 NRDE2Q9H7Z3 1164 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 ENTPD7Q9NQZ7 604 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 CHST12Q9NRB3 414 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 TBC1D13Q9NVG8 400 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 USP20Q9Y2K6 914 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 HES2Q9Y543 173 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 PCDHB2Q9Y5E7 798 aa18.25■□□□□ 0.51
COLCA2-207ENST00000639470 NCOR1O75376 2440 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 HOXA2O43364 376 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 TSPAN1O60635 241 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 EOMESO95936 686 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 GLRA2P23416 452 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 TOB1P50616 345 aaPredicted RBP18.24■□□□□ 0.51
COLCA2-207ENST00000639470 SAFBQ15424 915 aaKnown RBP eCLIP18.24■□□□□ 0.51
COLCA2-207ENST00000639470 DUSP6Q16828 381 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 TTC38Q5R3I4 469 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 SMG8Q8ND04 991 aaKnown RBP18.24■□□□□ 0.51
COLCA2-207ENST00000639470 VN1R3Q9BXE9 311 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 POLR3FQ9H1D9 316 aaPredicted RBP18.24■□□□□ 0.51
COLCA2-207ENST00000639470 SPG21Q9NZD8 308 aa18.24■□□□□ 0.51
COLCA2-207ENST00000639470 ARID2Q68CP9 1835 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 TTLL13PA6NNM8 815 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 DDHD2O94830 711 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 OR52Z1P0C646 297 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 ARL2P36404 184 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 SLC11A1P49279 550 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 PLCB3Q01970 1234 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 UBE3AQ05086 875 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 MBTD1Q05BQ5 628 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 SMAD4Q13485 552 aaKnown RBP18.23■□□□□ 0.51
COLCA2-207ENST00000639470 SMAD2Q15796 467 aaKnown RBP18.23■□□□□ 0.51
COLCA2-207ENST00000639470 AMHR2Q16671 573 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 NOMO2Q5JPE7 1267 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 SRGAP1Q7Z6B7 1085 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 NOSTRINQ8IVI9 506 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 C4orf32Q8N8J7 132 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 FAM184AQ8NB25 1140 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 BSNDQ8WZ55 320 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 ZSCAN31Q96LW9 406 aaPredicted RBP18.23■□□□□ 0.51
COLCA2-207ENST00000639470 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 INO80BQ9C086 356 aaPredicted RBP18.23■□□□□ 0.51
COLCA2-207ENST00000639470 ANKEF1Q9NU02 776 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
COLCA2-207ENST00000639470 PCDHB6Q9Y5E3 794 aa18.23■□□□□ 0.51
COLCA2-207ENST00000639470 PP2D1A8MPX8 630 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 F8W810 466 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 INO80B-WBP1J3KQ70 363 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 POMCP01189 267 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 PTENP60484 403 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 CDC42EP1Q00587 391 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 KANK3Q6NY19 840 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 TMC7Q7Z402 723 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 SMRP1Q8NCR6 262 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 TCP11Q8WWU5 503 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 LRFN3Q9BTN0 628 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 APOL6Q9BWW8 343 aa18.22■□□□□ 0.51
COLCA2-207ENST00000639470 FOXP1Q9H334 677 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms