RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 ARHGAP44Q17R89 818 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 MCF2L2Q86YR7 1114 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 AGBL3Q8NEM8 1001 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 CLEC4DQ8WXI8 215 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 CALR3Q96L12 384 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 CCDC43Q96MW1 224 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 AP1M1Q9BXS5 423 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 NOC2LQ9Y3T9 749 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 H0YHG0 523 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 ALAS1P13196 640 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 FNTAP49354 379 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 NBPF9Q3BBW0 867 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 TKFCQ3LXA3 575 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 NT5DC3Q86UY8 548 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 WHAMMQ8TF30 809 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 CTNNBL1Q8WYA6 563 aaPredicted RBP14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 SYT11Q9BT88 431 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 PCIF1Q9H4Z3 704 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 TMEM206Q9H813 350 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 OSGEPQ9NPF4 335 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 PGAP2Q9UHJ9 254 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 ZNRF3Q9ULT6 936 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 SCAF8Q9UPN6 1271 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 STXBP5LQ9Y2K9 1186 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 WNT10BO00744 389 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 TMEM253P0C7T8 217 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 ABCB4P21439 1286 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 RARRES1P49788 294 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 CFAP58Q5T655 872 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 PHLDB3Q6NSJ2 640 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 INTS8Q75QN2 995 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 NIM1KQ8IY84 436 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 SLC35G2Q8TBE7 412 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 RFFLQ8WZ73 363 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 CAPS2Q9BXY5 557 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 AGO4Q9HCK5 861 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 CD248Q9HCU0 757 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 SEPT11Q9NVA2 429 aaKnown RBP14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 MCM8Q9UJA3 840 aa14.32□□□□□ -0.12
CSNK1D-222ENST00000584377 MYH11P35749 1972 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 TISP43B9A030 160 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 KRIT1O00522 736 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 LRRN2O75325 713 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 RFX1P22670 979 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 QARSP47897 775 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 DLG4P78352 724 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 MAP3K10Q02779 954 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 MTMR1Q13613 665 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 ALCAMQ13740 583 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 PCNX4Q63HM2 1172 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 MREGQ8N565 214 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 ZKSCAN4Q969J2 545 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 ARL8AQ96BM9 186 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 DBR1Q9UK59 544 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 DAAM1Q9Y4D1 1078 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 NCANO14594 1321 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 WDR46O15213 610 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 EIF3HO15372 352 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 SART1O43290 800 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 BUB1BO60566 1050 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 CLSTN1O94985 981 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 TNFAIP3P21580 790 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 RDXP35241 583 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 ERVK-9P63128 1117 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 MRPS9P82933 396 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 HLTFQ14527 1009 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 TTMPQ5BVD1 217 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 IQCKQ8N0W5 287 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 LMO3Q8TAP4 145 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 HES6Q96HZ4 224 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 ACCSQ96QU6 501 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 TAF1DQ9H5J8 278 aaPredicted RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 RAVER2Q9HCJ3 691 aaKnown RBP14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 AMFRQ9UKV5 643 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 UBIAD1Q9Y5Z9 338 aa14.31□□□□□ -0.12
CSNK1D-222ENST00000584377 EMSYQ7Z589 1322 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 CHUKO15111 745 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 KRT14P02533 472 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 MAPTP10636 758 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 PLS3P13797 630 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 RXRBP28702 533 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 EN1Q05925 392 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 CETN1Q12798 172 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 RASGEF1CQ8N431 466 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 LPAR1Q92633 364 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 SH2D3AQ9BRG2 576 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 CBWD1Q9BRT8 395 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 PDGFDQ9GZP0 370 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 DDX47Q9H0S4 455 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 ISCUQ9H1K1 167 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 GRIN2DO15399 1336 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 IGSF9BQ9UPX0 1349 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 TNS1Q9HBL0 1735 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 FAM170AA1A519 330 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 CCDC188H7C350 402 aa14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 FOXN3O00409 490 aaPredicted RBP14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 EIF2AK2P19525 551 aaKnown RBP14.3□□□□□ -0.12
CSNK1D-222ENST00000584377 VAMP7P51809 220 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms