RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SERINC5Q86VE9 423 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 SEPT1Q8WYJ6 367 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 ITPKCQ96DU7 683 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 SLC9A7Q96T83 725 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 TRIM56Q9BRZ2 755 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 NT5C1AQ9BXI3 368 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 ZNF215Q9UL58 517 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 SCN5AQ14524 2016 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 ABHD14A-ACY1A0A1B0GW23 586 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 STXBP3O00186 592 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 EFCAB14O75071 495 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 ATP9AO75110 1047 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 CAND2O75155 1236 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 SMIM10L2AP0DMW4 78 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 SMIM10L2BP0DMW5 78 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 CPA1P15085 419 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 ADCY7P51828 1080 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 EVCP57679 992 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 ZNF200P98182 395 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 APOBRQ0VD83 1088 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 AP3B2Q13367 1082 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 COL9A2Q14055 689 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 PLEKHG4Q58EX7 1191 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 FILIP1Q7Z7B0 1213 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 MAFAQ8NHW3 353 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 BRF1Q92994 677 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 ATP6V0A1Q93050 837 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 PMEPA1Q969W9 287 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 MXRA8Q9BRK3 442 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 TRIM55Q9BYV6 548 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 RNPEPQ9H4A4 650 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 NAP1L2Q9ULW6 460 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 COL4A3BPQ9Y5P4 624 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 TANC1Q9C0D5 1861 aa11.18□□□□□ -0.62
HNRNPC-228ENST00000557033 EMSYQ7Z589 1322 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 NRCAMQ92823 1304 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 GSTTP1A0A1W2PQM5 241 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 KIF28PB7ZC32 967 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 PRPF3O43395 683 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 NBNO60934 754 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 SCG2P13521 617 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 TCF7P36402 384 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 RABGGTBP53611 331 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 IKBKEQ14164 716 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 CCDC85BQ15834 202 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 ZNF618Q5T7W0 954 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 CNKSR3Q6P9H4 555 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 RUFY3Q7L099 469 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 CCDC12Q8WUD4 166 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 TNPO1Q92973 898 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 GAS2L1Q99501 681 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 TM6SF1Q9BZW5 370 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 NKX2-4Q9H2Z4 354 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 SNTG2Q9NY99 539 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 ERAP1Q9NZ08 941 aa11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 YBX2Q9Y2T7 364 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-228ENST00000557033 NID2Q14112 1375 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 ESYT2A0FGR8 921 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 RSPH10B2B2RC85 870 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 MEIS1O00470 390 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 ZIC2O95409 532 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 RSPH10BP0C881 870 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 GRNP28799 593 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 GNA11P29992 359 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 THPOP40225 353 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 KCNJ6P48051 423 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 RNF144AP50876 292 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 ADAM17P78536 824 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 AKAP17AQ02040 695 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 CEP55Q53EZ4 464 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 UTP14CQ5TAP6 766 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 FBXL19Q6PCT2 694 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 NIPA1Q7RTP0 329 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 HERC6Q8IVU3 1022 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 WNT8BQ93098 351 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 ANO3Q9BYT9 981 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 ZMYND12Q9H0C1 365 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 SMARCAD1Q9H4L7 1026 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 C6orf50Q9HD87 102 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 KCNH7Q9NS40 1196 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 SETD4Q9NVD3 440 aa11.16□□□□□ -0.62
HNRNPC-228ENST00000557033 NFASCO94856 1347 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 GBF1Q92538 1859 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 DOCK5Q9H7D0 1870 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 FAM221BA6H8Z2 402 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 CYP3A4P08684 503 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 IFNAR1P17181 557 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 PDIA3P30101 505 aaKnown RBP11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 SREBF1P36956 1147 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 SP4Q02446 784 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 NTRK3Q16288 839 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 CTC1Q2NKJ3 1217 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 RPAINQ86UA6 219 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 GLG1Q92896 1179 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 DEPDC7Q96QD5 511 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 SDF4Q9BRK5 362 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 RNF26Q9BY78 433 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 PRDM12Q9H4Q4 367 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms