RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 TMEM143Q96AN5 459 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 NLRP4Q96MN2 994 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 TRAIPQ9BWF2 469 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 ZBP1Q9H171 429 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 KCNMB3Q9NPA1 279 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 CYP26B1Q9NR63 512 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 CHST12Q9NRB3 414 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 FAM105AQ9NUU6 356 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 FAM86C1Q9NVL1 165 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 DDX25Q9UHL0 483 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 PIN4Q9Y237 131 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 INPP5FQ9Y2H2 1132 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 RIF1Q5UIP0 2472 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 WNT7AO00755 349 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 ZNF623O75123 536 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 REC8O95072 547 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 BRD1O95696 1058 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 ASGR2P07307 311 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 HOXB8P17481 243 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 PPM1AP35813 382 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 ALDH7A1P49419 539 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 PSMC5P62195 406 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 SMC1AQ14683 1233 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 NONOQ15233 471 aaKnown RBP eCLIP11.31□□□□□ -0.68e-7■□□□□ 9.3
HNRNPC-218ENST00000555215 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 RARS2Q5T160 578 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 MOXD1Q6UVY6 613 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 CATSPER4Q7RTX7 472 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 TRIM22Q8IYM9 498 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 PRPF31Q8WWY3 499 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 IGSF21Q96ID5 467 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 PHF20Q9BVI0 1012 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 KCNH6Q9H252 994 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 RNF39Q9H2S5 420 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 DACT1Q9NYF0 836 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 TPCN1Q9ULQ1 816 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 USP34Q70CQ2 3546 aa11.31□□□□□ -0.6
HNRNPC-218ENST00000555215 KMT2EQ8IZD2 1858 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 A0A087WWV3 80 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 F8W810 466 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 CPLX1O14810 134 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 SRGAP2CP0DJJ0 459 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 CTSAP10619 480 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 FDPSP14324 419 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 AVPR2P30518 371 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 CA8P35219 290 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 QARSP47897 775 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 SPIRE1Q08AE8 756 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 PPP2R5CQ13362 524 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 TAS1R1Q7RTX1 841 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 KRT25Q7Z3Z0 450 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 DDX53Q86TM3 631 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 ZNF410Q86VK4 478 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 KREMEN2Q8NCW0 462 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 CASP10Q92851 521 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 TMEM169Q96HH4 297 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 TM6SF1Q9BZW5 370 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 DHX33Q9H6R0 707 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 XPNPEP1Q9NQW7 623 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 MIOSQ9NXC5 875 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 PCDHB2Q9Y5E7 798 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 COL4A3BPQ9Y5P4 624 aa11.3□□□□□ -0.6
HNRNPC-218ENST00000555215 LILRB3O75022 631 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 SFPQP23246 707 aaKnown RBP eCLIP11.29□□□□□ -0.69e-7■■■□□ 16.4
HNRNPC-218ENST00000555215 DNM2P50570 870 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 LAMTOR4Q0VGL1 99 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 NR5A1Q13285 461 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 CTTNQ14247 550 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 PTPN14Q15678 1187 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 TMC5Q6UXY8 1006 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 PIK3AP1Q6ZUJ8 805 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 MRPL10Q7Z7H8 261 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 SMG8Q8ND04 991 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 DYDC2Q96IM9 177 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 CEP170P1Q96L14 293 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 MRPL9Q9BYD2 267 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 C22orf23Q9BZE7 217 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 IRAK3Q9Y616 596 aa11.29□□□□□ -0.6
HNRNPC-218ENST00000555215 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 PFKFB2O60825 505 aa11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 SLITRK3O94933 977 aa11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 LARGE1O95461 756 aa11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 POMCP01189 267 aa11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 MYBP10242 640 aa11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 CDC42EP1Q00587 391 aa11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 CYP4A11Q02928 519 aa11.28□□□□□ -0.6
HNRNPC-218ENST00000555215 EPHA7Q15375 998 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms