RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 NOC2LQ9Y3T9 749 aaKnown RBP19.23■□□□□ 0.67
SCARB1-208ENST00000544327 DOCK1Q14185 1865 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 GOLGA6CA6NDK9 693 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 GOLGA6DP0CG33 693 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 VCAM1P19320 739 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 TNFAIP3P21580 790 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 KRT76Q01546 638 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 HAUS6Q7Z4H7 955 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 DAAM2Q86T65 1068 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 CD302Q8IX05 232 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 IQCKQ8N0W5 287 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 CPXCR1Q8N123 301 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 CTNNBL1Q8WYA6 563 aaPredicted RBP19.22■□□□□ 0.67
SCARB1-208ENST00000544327 SENP7Q9BQF6 1050 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 PDCD2LQ9BRP1 358 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 GOLPH3Q9H4A6 298 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 PXMP2Q9NR77 195 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 GOLGA6AQ9NYA3 693 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 HSPBP1Q9NZL4 362 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 NFU1Q9UMS0 254 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 SAMM50Q9Y512 469 aa19.22■□□□□ 0.67
SCARB1-208ENST00000544327 ANKRD62A6NC57 917 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 WDR64B1ANS9 1081 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 ZBED4O75132 1171 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 PPP3CAQ08209 521 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 CUL1Q13616 776 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 SLC35G2Q8TBE7 412 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 AGPAT1Q99943 283 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 CBWD1Q9BRT8 395 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 ZSCAN5CA6NGD5 496 aaPredicted RBP19.21■□□□□ 0.67
SCARB1-208ENST00000544327 FOXN3O00409 490 aaPredicted RBP19.21■□□□□ 0.67
SCARB1-208ENST00000544327 BACH1O14867 736 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 EIF2AK2P19525 551 aaKnown RBP19.21■□□□□ 0.67
SCARB1-208ENST00000544327 DLG4P78352 724 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 PLS1Q14651 629 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 UGCGQ16739 394 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 C1orf131Q8NDD1 294 aaKnown RBP19.21■□□□□ 0.67
SCARB1-208ENST00000544327 TAF1DQ9H5J8 278 aaPredicted RBP19.21■□□□□ 0.67
SCARB1-208ENST00000544327 SLITRK6Q9H5Y7 841 aa19.21■□□□□ 0.67
SCARB1-208ENST00000544327 TMCO5BA8MYB1 307 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 BUB1BO60566 1050 aaPredicted RBP19.2■□□□□ 0.66
SCARB1-208ENST00000544327 FAM153BP0C7A2 387 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 HSPA9P38646 679 aaKnown RBP19.2■□□□□ 0.66
SCARB1-208ENST00000544327 RNASE9P60153 205 aaKnown RBP19.2■□□□□ 0.66
SCARB1-208ENST00000544327 TGFB2P61812 414 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 FAM153CQ494X1 144 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 RNF207Q6ZRF8 634 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 MAEAQ7L5Y9 396 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 KLHL7Q8IXQ5 586 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 RDH13Q8NBN7 331 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 CCDC43Q96MW1 224 aaKnown RBP19.2■□□□□ 0.66
SCARB1-208ENST00000544327 ZIM3Q96PE6 472 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 TRERF1Q96PN7 1200 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 RUFY1Q96T51 708 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 RMDN3Q96TC7 470 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 PCIF1Q9H4Z3 704 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
SCARB1-208ENST00000544327 PIM2Q9P1W9 311 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 FAM153AQ9UHL3 310 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 EXOC7Q9UPT5 735 aa19.2■□□□□ 0.66
SCARB1-208ENST00000544327 IGSF9BQ9UPX0 1349 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 ESYT3A0FGR9 886 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 DDX3YO15523 660 aaKnown RBP19.19■□□□□ 0.66
SCARB1-208ENST00000544327 CCNE2O96020 404 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 ERVK-9P63128 1117 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 ZNF746Q6NUN9 644 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-208ENST00000544327 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-208ENST00000544327 PLEKHO2Q8TD55 490 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 IFT81Q8WYA0 676 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 TAOK3Q9H2K8 898 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 OSGEPQ9NPF4 335 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 HOMER2Q9NSB8 354 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 PFASO15067 1338 aa19.19■□□□□ 0.66
SCARB1-208ENST00000544327 TISP43B9A030 160 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 VWA5AO00534 786 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 ATP9AO75110 1047 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 ENPEPQ07075 957 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 MTMR2Q13614 643 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 ARHGAP44Q17R89 818 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 LRRC31Q6UY01 552 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 ARHGEF19Q8IW93 802 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 RHOT2Q8IXI1 618 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 GPRASP2Q96D09 838 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 UBE2TQ9NPD8 197 aaPredicted RBP19.18■□□□□ 0.66
SCARB1-208ENST00000544327 CTDP1Q9Y5B0 961 aaPredicted RBP19.18■□□□□ 0.66
SCARB1-208ENST00000544327 KRIT1O00522 736 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 MAFGO15525 162 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 SART1O43290 800 aaKnown RBP19.18■□□□□ 0.66
SCARB1-208ENST00000544327 ECHS1P30084 290 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 PEX3P56589 373 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 CLUL1Q15846 466 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 CFAP58Q5T655 872 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 ARHGEF16Q5VV41 709 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 SPIRE2Q8WWL2 714 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 PIK3R5Q8WYR1 880 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 SEC14L1Q92503 715 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 ARHGEF26Q96DR7 871 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 CARD9Q9H257 536 aa19.18■□□□□ 0.66
SCARB1-208ENST00000544327 TCEAL9Q9UHQ7 104 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms