RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TRADDQ15628 312 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 ZC2HC1CQ53FD0 456 aaPredicted RBP16.29■□□□□ 0.2
CHFR-223ENST00000544268 DPY19L2P1Q6NXN4 242 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 RABEP2Q9H5N1 569 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 KLC4Q9NSK0 619 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 ARP10275 920 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
CHFR-223ENST00000544268 GJA5P36382 358 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 FMNL3Q8IVF7 1028 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 WRAP73Q9P2S5 460 aaPredicted RBP16.29■□□□□ 0.2
CHFR-223ENST00000544268 OPA1O60313 960 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 RPA1P27694 616 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 NMT1P30419 496 aaKnown RBP16.28■□□□□ 0.2
CHFR-223ENST00000544268 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
CHFR-223ENST00000544268 PTK2Q05397 1052 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 MOGSQ13724 837 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 PLCB4Q15147 1175 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 TCERG1LQ5VWI1 586 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 SAMD3Q8N6K7 520 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 CEP63Q96MT8 703 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 RMDN3Q96TC7 470 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 EIF2AK1Q9BQI3 630 aaKnown RBP16.28■□□□□ 0.2
CHFR-223ENST00000544268 MXRA8Q9BRK3 442 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 DNM3Q9UQ16 869 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 ASTN1O14525 1302 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 FRMPD4Q14CM0 1322 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 SERPING1P05155 500 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 KLHL30Q0D2K2 578 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 KIAA0753Q2KHM9 967 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 ZC3H12AQ5D1E8 599 aaKnown RBP16.28■□□□□ 0.2
CHFR-223ENST00000544268 HAUS3Q68CZ6 603 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 LBX2Q6XYB7 198 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 ZNF571Q7Z3V5 609 aaPredicted RBP16.28■□□□□ 0.2
CHFR-223ENST00000544268 SYT2Q8N9I0 419 aaPredicted RBP16.28■□□□□ 0.2
CHFR-223ENST00000544268 SLC5A5Q92911 643 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 BTBD7Q9P203 1132 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 PCDHB13Q9Y5F0 798 aa16.28■□□□□ 0.2
CHFR-223ENST00000544268 PJA2O43164 708 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 PSMD10O75832 226 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 GCNT3O95395 438 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 EPB41P11171 864 aaKnown RBP16.27■□□□□ 0.2
CHFR-223ENST00000544268 PGM5Q15124 567 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 KNOP1Q1ED39 458 aaKnown RBP16.27■□□□□ 0.2
CHFR-223ENST00000544268 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 TPH2Q8IWU9 490 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 ALS2CR12Q96Q35 445 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 ZNF577Q9BSK1 485 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 WDR11Q9BZH6 1224 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
CHFR-223ENST00000544268 PXMP2Q9NR77 195 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 FAM184BQ9ULE4 1060 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 HYOU1Q9Y4L1 999 aa16.27■□□□□ 0.2
CHFR-223ENST00000544268 SSU72P8A0A1W2PR75 194 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 CETN3O15182 167 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 RASSF9O75901 435 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 INHBEP58166 350 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 SND1Q7KZF4 910 aaKnown RBP eCLIP16.27■□□□□ 0.19
CHFR-223ENST00000544268 OTOP1Q7RTM1 612 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 SLC10A4Q96EP9 437 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 NOX5Q96PH1 765 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 ACAD9Q9H845 621 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 PKD2L1Q9P0L9 805 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 AGTPBP1Q9UPW5 1226 aa16.27■□□□□ 0.19
CHFR-223ENST00000544268 RBAK-RBAKDNI3L0D1 243 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 ZEB2O60315 1214 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 NEBLO76041 1014 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 PON1P27169 355 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 CCDC181Q5TID7 509 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 EPM2AIP1Q7L775 607 aaPredicted RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 TRMT1LQ7Z2T5 733 aaKnown RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 TSEN2Q8NCE0 465 aaKnown RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 AENQ8WTP8 325 aaKnown RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 DYDC2Q96IM9 177 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 CYP39A1Q9NYL5 469 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 GAS7O60861 476 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 GLI1P08151 1106 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 MYCLP12524 364 aaPredicted RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 UCHL3P15374 230 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 MARSP56192 900 aaKnown RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 IRX1P78414 480 aaPredicted RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 ACTN3Q08043 901 aaPredicted RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 SLC18A3Q16572 532 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 TKFCQ3LXA3 575 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 IRF2BP2Q7Z5L9 587 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 ZNF513Q8N8E2 541 aaPredicted RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 SH2D3AQ9BRG2 576 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 NMRK2Q9NPI5 230 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 KCNH7Q9NS40 1196 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 ARMCX3Q9UH62 379 aaPredicted RBP16.26■□□□□ 0.19
CHFR-223ENST00000544268 UBIAD1Q9Y5Z9 338 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 A0A0G2JMZ2 1700 aa16.26■□□□□ 0.19
CHFR-223ENST00000544268 GRID2IPA4D2P6 1211 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 IPO5O00410 1097 aaKnown RBP16.25■□□□□ 0.19
CHFR-223ENST00000544268 ASIC2Q16515 512 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 MAEAQ7L5Y9 396 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms