RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CDCA2Q69YH5 1023 aaPredicted RBP7.73□□□□□ -1.17
CCDC7-209ENST00000539197 KANSL1Q7Z3B3 1105 aa7.73□□□□□ -1.17
CCDC7-209ENST00000539197 MRGPREQ86SM8 312 aa7.73□□□□□ -1.17
CCDC7-209ENST00000539197 PRPF6O94906 941 aaKnown RBP7.72□□□□□ -1.17
CCDC7-209ENST00000539197 NR4A1P22736 598 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 KIR2DL3P43628 341 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 NPEPPSP55786 919 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 ADCY2Q08462 1091 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 TIGD7Q6NT04 549 aaPredicted RBP7.72□□□□□ -1.17
CCDC7-209ENST00000539197 HTR3DQ70Z44 454 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 CMTM4Q8IZR5 234 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 MDGA1Q8NFP4 955 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 PITHD1Q9GZP4 211 aaPredicted RBP7.72□□□□□ -1.17
CCDC7-209ENST00000539197 TOMM22Q9NS69 142 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 OXSMQ9NWU1 459 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 TRPS1Q9UHF7 1281 aa7.72□□□□□ -1.17
CCDC7-209ENST00000539197 A0A0A6YYJ9 748 aa7.71□□□□□ -1.18
CCDC7-209ENST00000539197 GRXCR1A8MXD5 290 aa7.71□□□□□ -1.18
CCDC7-209ENST00000539197 FLT3P36888 993 aa7.71□□□□□ -1.18
CCDC7-209ENST00000539197 SPIDRQ14159 915 aa7.71□□□□□ -1.18
CCDC7-209ENST00000539197 UBE2R2Q712K3 238 aaPredicted RBP7.71□□□□□ -1.18
CCDC7-209ENST00000539197 VRK3Q8IV63 474 aa7.71□□□□□ -1.18
CCDC7-209ENST00000539197 ZNF276Q8N554 614 aa7.71□□□□□ -1.18
CCDC7-209ENST00000539197 MLST8Q9BVC4 326 aa7.71□□□□□ -1.18
CCDC7-209ENST00000539197 ING3Q9NXR8 418 aa7.71□□□□□ -1.18
CCDC7-209ENST00000539197 OPHN1O60890 802 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 ATP2A2P16615 1042 aaKnown RBP7.7□□□□□ -1.18
CCDC7-209ENST00000539197 HK1P19367 917 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 MAN2A1Q16706 1144 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 PHYKPLQ8IUZ5 450 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 SYNE4Q8N205 404 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 C7orf31Q8N865 590 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 GPR150Q8NGU9 434 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 LENG9Q96B70 501 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
CCDC7-209ENST00000539197 MTSS1O43312 755 aa7.69□□□□□ -1.18
CCDC7-209ENST00000539197 GNAT2P19087 354 aa7.69□□□□□ -1.18
CCDC7-209ENST00000539197 CFAP100Q494V2 611 aa7.69□□□□□ -1.18
CCDC7-209ENST00000539197 SH3TC2Q8TF17 1288 aa7.69□□□□□ -1.18
CCDC7-209ENST00000539197 ST8SIA2Q92186 375 aa7.69□□□□□ -1.18
CCDC7-209ENST00000539197 UIMC1Q96RL1 719 aa7.69□□□□□ -1.18
CCDC7-209ENST00000539197 NOL10Q9BSC4 688 aaKnown RBP7.69□□□□□ -1.18
CCDC7-209ENST00000539197 OSBPL6Q9BZF3 934 aa7.69□□□□□ -1.18
CCDC7-209ENST00000539197 SPO11Q9Y5K1 396 aa7.69□□□□□ -1.18
CCDC7-209ENST00000539197 LCHNA4D1U4 455 aa7.68□□□□□ -1.18
CCDC7-209ENST00000539197 ELL2O00472 640 aaPredicted RBP7.68□□□□□ -1.18
CCDC7-209ENST00000539197 ASMTLO95671 621 aa7.68□□□□□ -1.18
CCDC7-209ENST00000539197 PABPC4Q13310 644 aaKnown RBP eCLIP7.68□□□□□ -1.18
CCDC7-209ENST00000539197 C21orf62-AS1Q17RA5 79 aa7.68□□□□□ -1.18
CCDC7-209ENST00000539197 MBNL2Q5VZF2 373 aaKnown RBP7.68□□□□□ -1.18
CCDC7-209ENST00000539197 KIAA1841Q6NSI8 718 aa7.68□□□□□ -1.18
CCDC7-209ENST00000539197 APBB1IPQ7Z5R6 666 aaPredicted RBP7.68□□□□□ -1.18
CCDC7-209ENST00000539197 CXorf67Q86X51 503 aaPredicted RBP7.68□□□□□ -1.18
CCDC7-209ENST00000539197 NXPE1Q8N323 547 aa7.68□□□□□ -1.18
CCDC7-209ENST00000539197 PIK3C3Q8NEB9 887 aa7.68□□□□□ -1.18
CCDC7-209ENST00000539197 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
CCDC7-209ENST00000539197 FSBPO95073 299 aa7.67□□□□□ -1.18
CCDC7-209ENST00000539197 PCDH8O95206 1070 aa7.67□□□□□ -1.18
CCDC7-209ENST00000539197 GCP02774 474 aa7.67□□□□□ -1.18
CCDC7-209ENST00000539197 GAAP10253 952 aa7.67□□□□□ -1.18
CCDC7-209ENST00000539197 ZFP36P26651 326 aaKnown RBP7.67□□□□□ -1.18
CCDC7-209ENST00000539197 DCAF17Q5H9S7 520 aaPredicted RBP7.67□□□□□ -1.18
CCDC7-209ENST00000539197 NAIF1Q69YI7 327 aaPredicted RBP7.67□□□□□ -1.18
CCDC7-209ENST00000539197 RHOUQ7L0Q8 258 aa7.67□□□□□ -1.18
CCDC7-209ENST00000539197 SORCS3Q9UPU3 1222 aa7.67□□□□□ -1.18
CCDC7-209ENST00000539197 FAM83GA6ND36 823 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 ZNF891A8MT65 544 aaPredicted RBP7.66□□□□□ -1.18
CCDC7-209ENST00000539197 PPFIA4O75335 1185 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 RHOBTB3O94955 611 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 BMP5P22003 454 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 PROZP22891 400 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 CD69Q07108 199 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 SF3A1Q15459 793 aaKnown RBP7.66□□□□□ -1.18
CCDC7-209ENST00000539197 DPY19L2P1Q6NXN4 242 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 ZZZ3Q8IYH5 903 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 HIST1H2AHQ96KK5 128 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 HIST1H2AJQ99878 128 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 ZNF768Q9H5H4 540 aaKnown RBP7.66□□□□□ -1.18
CCDC7-209ENST00000539197 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.66□□□□□ -1.18
CCDC7-209ENST00000539197 FZD1Q9UP38 647 aa7.66□□□□□ -1.18
CCDC7-209ENST00000539197 PTPAQ15257 358 aa7.65□□□□□ -1.18
CCDC7-209ENST00000539197 NFE2L2Q16236 605 aa7.65□□□□□ -1.18
CCDC7-209ENST00000539197 LY6G5CQ5SRR4 150 aa7.65□□□□□ -1.18
CCDC7-209ENST00000539197 CPT1CQ8TCG5 803 aa7.65□□□□□ -1.18
CCDC7-209ENST00000539197 PROKR1Q8TCW9 393 aa7.65□□□□□ -1.18
CCDC7-209ENST00000539197 CHTF18Q8WVB6 975 aa7.65□□□□□ -1.18
CCDC7-209ENST00000539197 CPEB1Q9BZB8 566 aaKnown RBP7.65□□□□□ -1.18
CCDC7-209ENST00000539197 ENKD1Q9H0I2 346 aa7.65□□□□□ -1.18
CCDC7-209ENST00000539197 MS4A5Q9H3V2 200 aa7.65□□□□□ -1.18
CCDC7-209ENST00000539197 NRP1O14786 923 aa7.64□□□□□ -1.19
CCDC7-209ENST00000539197 KPNA6O60684 536 aa7.64□□□□□ -1.19
CCDC7-209ENST00000539197 RECQL4O94761 1208 aa7.64□□□□□ -1.19
CCDC7-209ENST00000539197 ABHD16AO95870 558 aa7.64□□□□□ -1.19
CCDC7-209ENST00000539197 ITGB1P05556 798 aa7.64□□□□□ -1.19
CCDC7-209ENST00000539197 CASRP41180 1078 aa7.64□□□□□ -1.19
CCDC7-209ENST00000539197 ZBTB41Q5SVQ8 909 aa7.64□□□□□ -1.19
CCDC7-209ENST00000539197 ZNF496Q96IT1 587 aaPredicted RBP7.64□□□□□ -1.19
CCDC7-209ENST00000539197 ZKSCAN5Q9Y2L8 839 aa7.64□□□□□ -1.19
CCDC7-209ENST00000539197 MYPNQ86TC9 1320 aa7.63□□□□□ -1.19
CCDC7-209ENST00000539197 HOXA3O43365 443 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms