RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TOB1P50616 345 aaPredicted RBP15.61■□□□□ 0.09
VTI1A-206ENST00000489142 RBM10P98175 930 aaKnown RBP15.61■□□□□ 0.09
VTI1A-206ENST00000489142 COL19A1Q14993 1142 aa15.61■□□□□ 0.09
VTI1A-206ENST00000489142 POTEGQ6S5H5 508 aa15.61■□□□□ 0.09
VTI1A-206ENST00000489142 FAM43BQ6ZT52 329 aaPredicted RBP15.61■□□□□ 0.09
VTI1A-206ENST00000489142 CATSPER3Q86XQ3 398 aa15.61■□□□□ 0.09
VTI1A-206ENST00000489142 EXOC8Q8IYI6 725 aa15.61■□□□□ 0.09
VTI1A-206ENST00000489142 MICAL1Q8TDZ2 1067 aa15.61■□□□□ 0.09
VTI1A-206ENST00000489142 GPRC5CQ9NQ84 441 aa15.61■□□□□ 0.09
VTI1A-206ENST00000489142 CHST12Q9NRB3 414 aa15.61■□□□□ 0.09
VTI1A-206ENST00000489142 ANKEF1Q9NU02 776 aa15.61■□□□□ 0.09
VTI1A-206ENST00000489142 NT5C1B-RDH14C9J2C7 533 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 PER2O15055 1255 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 GAS2O43903 313 aaKnown RBP15.6■□□□□ 0.09
VTI1A-206ENST00000489142 EOMESO95936 686 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 ERVFC1P60507 584 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 CAPSQ13938 189 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 CTC1Q2NKJ3 1217 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 PLPP4Q5VZY2 271 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 MCTP1Q6DN14 999 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 KCNT2Q6UVM3 1135 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 SRGAP1Q7Z6B7 1085 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 CPB2Q96IY4 423 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 ZNF558Q96NG5 402 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 POLR3FQ9H1D9 316 aaPredicted RBP15.6■□□□□ 0.09
VTI1A-206ENST00000489142 CD320Q9NPF0 282 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 TLR9Q9NR96 1032 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 NOL7Q9UMY1 257 aaKnown RBP15.6■□□□□ 0.09
VTI1A-206ENST00000489142 PCDHB6Q9Y5E3 794 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 PCDHB2Q9Y5E7 798 aa15.6■□□□□ 0.09
VTI1A-206ENST00000489142 GRXCR2A6NFK2 248 aa15.59■□□□□ 0.09
VTI1A-206ENST00000489142 ZC3H11AO75152 810 aaKnown RBP eCLIP15.59■□□□□ 0.09
VTI1A-206ENST00000489142 DGAT1O75907 488 aa15.59■□□□□ 0.09
VTI1A-206ENST00000489142 ERLIN2O94905 339 aa15.59■□□□□ 0.09
VTI1A-206ENST00000489142 GLRA2P23416 452 aa15.59■□□□□ 0.09
VTI1A-206ENST00000489142 U2AF2P26368 475 aaKnown RBP eCLIP15.59■□□□□ 0.09
VTI1A-206ENST00000489142 HOXA11P31270 313 aaPredicted RBP15.59■□□□□ 0.09
VTI1A-206ENST00000489142 C4orf32Q8N8J7 132 aa15.59■□□□□ 0.09
VTI1A-206ENST00000489142 TBC1D32Q96NH3 1257 aa15.59■□□□□ 0.09
VTI1A-206ENST00000489142 GBP3Q9H0R5 595 aa15.59■□□□□ 0.09
VTI1A-206ENST00000489142 TUFT1Q9NNX1 390 aa15.59■□□□□ 0.09
VTI1A-206ENST00000489142 INO80B-WBP1J3KQ70 363 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 ASAP2O43150 1006 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 TSPAN1O60635 241 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 GJB2P29033 226 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 ARL2P36404 184 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 NDUFV1P49821 464 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 AFF1P51825 1210 aaKnown RBP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 PTENP60484 403 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 PTGDRQ13258 359 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 MXD4Q14582 209 aaPredicted RBP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 ECM1Q16610 540 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 UBXN11Q5T124 520 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 AGMOQ6ZNB7 445 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 TMEM173Q86WV6 379 aaPredicted RBP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 CDR2LQ86X02 465 aaPredicted RBP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 MRPS27Q92552 414 aaKnown RBP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 KHSRPQ92945 711 aaKnown RBP eCLIP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 TCF25Q9BQ70 676 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 POLR3CQ9BUI4 534 aaPredicted RBP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 TRAIPQ9BWF2 469 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 EIF2AQ9BY44 585 aaKnown RBP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 TLE6Q9H808 572 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 POLD4Q9HCU8 107 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 ENTPD7Q9NQZ7 604 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 TBC1D13Q9NVG8 400 aa15.58■□□□□ 0.08
VTI1A-206ENST00000489142 BARX2Q9UMQ3 279 aaPredicted RBP15.58■□□□□ 0.08
VTI1A-206ENST00000489142 LRRIQ4A6NIV6 560 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 PP2D1A8MPX8 630 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 FSCN2O14926 492 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 B4GALT5O43286 388 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 NCK2O43639 380 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 B4GALT3O60512 393 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 OFD1O75665 1012 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 GLP2RO95838 553 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 CCT6AP40227 531 aaKnown RBP15.57■□□□□ 0.08
VTI1A-206ENST00000489142 TRAPPC10P48553 1259 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 RAB27AP51159 221 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 BCAR1P56945 870 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 UBE3AQ05086 875 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 MBTD1Q05BQ5 628 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 ORC2Q13416 577 aaPredicted RBP15.57■□□□□ 0.08
VTI1A-206ENST00000489142 ADAM15Q13444 863 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 TFDP1Q14186 410 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 CSPP1Q1MSJ5 1256 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 NOMO2Q5JPE7 1267 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 GLB1LQ6UWU2 654 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 SLC39A11Q8N1S5 342 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 VN1R2Q8NFZ6 395 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 ERMNQ8TAM6 284 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 PPP2R3CQ969Q6 453 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 MRPL9Q9BYD2 267 aaKnown RBP15.57■□□□□ 0.08
VTI1A-206ENST00000489142 SPG21Q9NZD8 308 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 DNAJB4Q9UDY4 337 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 HES2Q9Y543 173 aa15.57■□□□□ 0.08
VTI1A-206ENST00000489142 TDRD15B5MCY1 1934 aaKnown RBP15.56■□□□□ 0.08
VTI1A-206ENST00000489142 HIDE1A8MVS5 230 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 ZNF623O75123 536 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 SKIP12755 728 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 RPA1P27694 616 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms