RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 PDGFCQ9NRA1 345 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 INTS13Q9NVM9 706 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 TBC1D7Q9P0N9 293 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 WRAP73Q9P2S5 460 aaPredicted RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 TBX21Q9UL17 535 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 PCDHA2Q9Y5H9 948 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 PCDHA11Q9Y5I1 949 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 UNC79Q9P2D8 2635 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 ARID2Q68CP9 1835 aa9.21□□□□□ -0.93
FDPS-209ENST00000471117 CFAP47Q6ZTR5 3102 aa9.21□□□□□ -0.93
FDPS-209ENST00000471117 KAT6AQ92794 2004 aa9.21□□□□□ -0.93
FDPS-209ENST00000471117 A0A1B0GTH6 734 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 A0A1W2PQ45 241 aaPredicted RBP9.21□□□□□ -0.94
FDPS-209ENST00000471117 A0A1W2PQY0 241 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 ARHGEF35A5YM69 484 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 PRR23AA6NEV1 266 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 KCNJ18B7U540 433 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 H0Y858 1186 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 BACH1O14867 736 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 TBCAO75347 108 aaKnown RBP9.21□□□□□ -0.94
FDPS-209ENST00000471117 LYPLA2O95372 231 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 GH1P01241 217 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 CYP2C18P33260 490 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 TNFAIP2Q03169 654 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 LAMC2Q13753 1193 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 KCNJ12Q14500 433 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 NR1I3Q14994 352 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 KRT31Q15323 416 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 FAM160B1Q5W0V3 765 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 CENPPQ6IPU0 288 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 ABHD15Q6UXT9 468 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 C1orf186Q6ZWK4 172 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 APTXQ7Z2E3 356 aaKnown RBP9.21□□□□□ -0.94
FDPS-209ENST00000471117 DGLUCYQ7Z3D6 616 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 IRF2BP1Q8IU81 584 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 VSTM4Q8IW00 320 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 MYOCDQ8IZQ8 938 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 CSGALNACT2Q8N6G5 542 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 GLIS3Q8NEA6 775 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 ANKRD20A12PQ8NF67 263 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 CCDC43Q96MW1 224 aaKnown RBP9.21□□□□□ -0.94
FDPS-209ENST00000471117 SPATA33Q96N06 139 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 CTAGE1Q96RT6 745 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 REEP2Q9BRK0 252 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 SRRTQ9BXP5 876 aaKnown RBP9.21□□□□□ -0.94
FDPS-209ENST00000471117 FGFBP2Q9BYJ0 223 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 KCNF1Q9H3M0 494 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 THAP9Q9H5L6 903 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 BCAS3Q9H6U6 928 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 ALG13Q9NP73 1137 aaKnown RBP9.21□□□□□ -0.94
FDPS-209ENST00000471117 IL23AQ9NPF7 189 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 RRAGDQ9NQL2 400 aaPredicted RBP9.21□□□□□ -0.94
FDPS-209ENST00000471117 TLR9Q9NR96 1032 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 IMPACTQ9P2X3 320 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 GABBR1Q9UBS5 961 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 LIMA1Q9UHB6 759 aaKnown RBP9.21□□□□□ -0.94
FDPS-209ENST00000471117 MUTYHQ9UIF7 546 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 COL4A3BPQ9Y5P4 624 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 WDR87Q6ZQQ6 2873 aa9.21□□□□□ -0.94
FDPS-209ENST00000471117 GSTTP1A0A1W2PQM5 241 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 LRRC10BA6NIK2 292 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 RSPH10B2B2RC85 870 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 SEPT4O43236 478 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 FAM13AO94988 1023 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 ARHGEF15O94989 841 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 ATG7O95352 703 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 PGK1P00558 417 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 RSPH10BP0C881 870 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 GAP43P17677 238 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 MSNP26038 577 aaKnown RBP9.2□□□□□ -0.94
FDPS-209ENST00000471117 COPB1P53618 953 aaKnown RBP9.2□□□□□ -0.94
FDPS-209ENST00000471117 GSDMDP57764 484 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 ARHGAP1Q07960 439 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 UGCGQ16739 394 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 ST3GAL2Q16842 350 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 DUSP28Q4G0W2 176 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 FILIP1LQ4L180 1135 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 TCP11X2Q5H9J9 407 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 SWSAP1Q6NVH7 229 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 ANKRD33Q7Z3H0 272 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 SPRED2Q7Z698 418 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 SFR1Q86XK3 245 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 SUGP1Q8IWZ8 645 aaKnown RBP9.2□□□□□ -0.94
FDPS-209ENST00000471117 C4orf19Q8IY42 314 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 OR6J1Q8NGC5 347 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 CACTINQ8WUQ7 758 aaKnown RBP9.2□□□□□ -0.94
FDPS-209ENST00000471117 COPS5Q92905 334 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 EMID1Q96A84 441 aaPredicted RBP9.2□□□□□ -0.94
FDPS-209ENST00000471117 POLD4Q9HCU8 107 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 ZNF302Q9NR11 478 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 ANKEF1Q9NU02 776 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 TAB2Q9NYJ8 693 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 MAGEC2Q9UBF1 373 aaPredicted RBP9.2□□□□□ -0.94
FDPS-209ENST00000471117 DBR1Q9UK59 544 aaKnown RBP9.2□□□□□ -0.94
FDPS-209ENST00000471117 FAM184BQ9ULE4 1060 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 SLC4A7Q9Y6M7 1214 aa9.2□□□□□ -0.94
FDPS-209ENST00000471117 ZNF292O60281 2723 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms