RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 TBR1Q16650 682 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 WDR72Q3MJ13 1102 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 FGD2Q7Z6J4 655 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 THEMISQ8N1K5 641 aaPredicted RBP6.26□□□□□ -1.41
PMS1-202ENST00000374826 UBXN4Q92575 508 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 MRFAP1L1Q96HT8 127 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 CELF4Q9BZC1 486 aaKnown RBP6.26□□□□□ -1.41
PMS1-202ENST00000374826 SLC52A1Q9NWF4 448 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 ARHGAP28Q9P2N2 729 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 NWD1Q149M9 1564 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 SETBP1Q9Y6X0 1596 aa6.26□□□□□ -1.41
PMS1-202ENST00000374826 RGPD8O14715 1765 aaPredicted RBP6.26□□□□□ -1.41
PMS1-202ENST00000374826 NALCNQ8IZF0 1738 aa6.25□□□□□ -1.41
PMS1-202ENST00000374826 PRAMEF25A6NGN4 478 aa6.25□□□□□ -1.41
PMS1-202ENST00000374826 KCNQ2O43526 872 aa6.25□□□□□ -1.41
PMS1-202ENST00000374826 ACRV1P26436 265 aa6.25□□□□□ -1.41
PMS1-202ENST00000374826 RPS19P39019 145 aaKnown RBP6.25□□□□□ -1.41
PMS1-202ENST00000374826 CXXC5Q7LFL8 322 aaKnown RBP6.25□□□□□ -1.41
PMS1-202ENST00000374826 CACTINQ8WUQ7 758 aaKnown RBP6.25□□□□□ -1.41
PMS1-202ENST00000374826 ZSWIM4Q9H7M6 989 aa6.25□□□□□ -1.41
PMS1-202ENST00000374826 KIAA1210Q9ULL0 1709 aa6.25□□□□□ -1.41
PMS1-202ENST00000374826 SPATA31E1Q6ZUB1 1445 aa6.25□□□□□ -1.41
PMS1-202ENST00000374826 ANKRD30BQ9BXX2 1392 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 TCRBV16S1A1N1A0A5B0 115 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 PLD2O14939 933 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 ARHGAP6O43182 974 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 C4BPAP04003 597 aaKnown RBP6.24□□□□□ -1.41
PMS1-202ENST00000374826 INHBCP55103 352 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 FOXL1Q12952 345 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 LARP4Q71RC2 724 aaKnown RBP eCLIP6.24□□□□□ -1.41
PMS1-202ENST00000374826 ZNF575Q86XF7 245 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 NOSTRINQ8IVI9 506 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 ZNF808Q8N4W9 903 aaPredicted RBP6.24□□□□□ -1.41
PMS1-202ENST00000374826 FBXO41Q8TF61 875 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 NEU4Q8WWR8 484 aaPredicted RBP6.24□□□□□ -1.41
PMS1-202ENST00000374826 CFHR4Q92496 578 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 TRIM39Q9HCM9 518 aa6.24□□□□□ -1.41
PMS1-202ENST00000374826 PUF60Q9UHX1 559 aaKnown RBP6.24□□□□□ -1.41
PMS1-202ENST00000374826 ARHGEF28Q8N1W1 1705 aaKnown RBP6.24□□□□□ -1.41
PMS1-202ENST00000374826 DHX57Q6P158 1386 aaKnown RBP6.23□□□□□ -1.41
PMS1-202ENST00000374826 A0A087X1B8 175 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 SCDO00767 359 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 NPTXRO95502 500 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 PTGS1P23219 599 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 AOAHP28039 575 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 HIBADHP31937 336 aaKnown RBP6.23□□□□□ -1.41
PMS1-202ENST00000374826 HERVK_113P62684 666 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 FNDC7Q5VTL7 733 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 USP30Q70CQ3 517 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 OVCH1Q7RTY7 1134 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 PCGF6Q9BYE7 350 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 MSL2Q9HCI7 577 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 GALNT8Q9NY28 637 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 PLA2G3Q9NZ20 509 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 FBXO10Q9UK96 956 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 EID1Q9Y6B2 187 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 ALKQ9UM73 1620 aa6.23□□□□□ -1.41
PMS1-202ENST00000374826 ZNF335Q9H4Z2 1342 aaPredicted RBP6.23□□□□□ -1.41
PMS1-202ENST00000374826 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.22□□□□□ -1.41
PMS1-202ENST00000374826 TRPM1Q7Z4N2 1603 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 PLEKHG1Q9ULL1 1385 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 CPS1P31327 1500 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 ASXL1Q8IXJ9 1541 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 HMGCRP04035 888 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 KCNA6P17658 529 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 TGM1P22735 817 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 MC4RP32245 332 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 KCNQ1P51787 676 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 IL13RA1P78552 427 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 SQSTM1Q13501 440 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 TUBA3CQ13748 450 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 EIF4HQ15056 248 aaKnown RBP6.22□□□□□ -1.41
PMS1-202ENST00000374826 CCDC144BQ3MJ40 725 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 FNDC3BQ53EP0 1204 aaKnown RBP6.22□□□□□ -1.41
PMS1-202ENST00000374826 TRIM68Q6AZZ1 485 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 FSTL4Q6MZW2 842 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 ABHD17CQ6PCB6 329 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 TUBA3EQ6PEY2 450 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 IGSF22Q8N9C0 903 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 SH3TC2Q8TF17 1288 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 WNK4Q96J92 1243 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 ZNF703Q9H7S9 590 aaPredicted RBP6.22□□□□□ -1.41
PMS1-202ENST00000374826 INCENPQ9NQS7 918 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 BTBD7Q9P203 1132 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 ADAMTS13Q76LX8 1427 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 MYOM2P54296 1465 aa6.22□□□□□ -1.41
PMS1-202ENST00000374826 SLC12A8A0AV02 714 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 MSX2P35548 267 aaPredicted RBP6.21□□□□□ -1.42
PMS1-202ENST00000374826 SEC23AQ15436 765 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 STILQ15468 1287 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 TM4SF20Q53R12 229 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 TMEM177Q53S58 311 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 CLUHP3Q96NS8 147 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 KIAA1683Q9H0B3 1180 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 NELFAQ9H3P2 528 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 MMRN2Q9H8L6 949 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 KANSL2Q9H9L4 492 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 TLR9Q9NR96 1032 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 KCNH7Q9NS40 1196 aa6.21□□□□□ -1.42
PMS1-202ENST00000374826 AURKAIP1Q9NWT8 199 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms