RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ZBTB10Q96DT7 871 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 HAS3O00219 553 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 TEX33O43247 280 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 PGK1P00558 417 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 TMOD1P28289 359 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 PSEN2P49810 448 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 MARSP56192 900 aaKnown RBP17.11■□□□□ 0.33
CTSA-202ENST00000354880 C1QTNF8P60827 252 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 NKX3-2P78367 333 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 PURAQ00577 322 aaKnown RBP17.11■□□□□ 0.33
CTSA-202ENST00000354880 TAS1R3Q7RTX0 852 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 RHPN2Q8IUC4 686 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 VSTM4Q8IW00 320 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 LINC01465Q8N7H1 131 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 SLAIN1Q8ND83 568 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 NOC4LQ9BVI4 516 aaKnown RBP17.11■□□□□ 0.33
CTSA-202ENST00000354880 XPNPEP3Q9NQH7 507 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 NRCAMQ92823 1304 aa17.11■□□□□ 0.33
CTSA-202ENST00000354880 ASAP2O43150 1006 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 SMIM10L2AP0DMW4 78 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 SMIM10L2BP0DMW5 78 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 STRN3Q13033 797 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 MYBPC2Q14324 1141 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 MARCH8Q5T0T0 291 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 TMC6Q7Z403 805 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 SLC9A9Q8IVB4 645 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 C12orf56Q8IXR9 622 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 TMEM174Q8WUU8 243 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 TRIM44Q96DX7 344 aaPredicted RBP17.1■□□□□ 0.33
CTSA-202ENST00000354880 SETD4Q9NVD3 440 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 DMAC2Q9NW81 257 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 LGALS16A8MUM7 142 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 K7ERI5 159 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 PES1O00541 588 aaKnown RBP17.1■□□□□ 0.33
CTSA-202ENST00000354880 SLC16A3O15427 465 aaKnown RBP17.1■□□□□ 0.33
CTSA-202ENST00000354880 ZEB2O60315 1214 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 ADAMTS4O75173 837 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 AKAP3O75969 853 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 SRGAP2CP0DJJ0 459 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 MAN2A1Q16706 1144 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 RNF149Q8NC42 400 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 LMBR1Q8WVP7 490 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 TMEM134Q9H6X4 195 aa17.1■□□□□ 0.33
CTSA-202ENST00000354880 TISP43B9A030 160 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 INHAP05111 366 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 GJB1P08034 283 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 EPB41P11171 864 aaKnown RBP17.09■□□□□ 0.33
CTSA-202ENST00000354880 GRK4P32298 578 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 CYP2J2P51589 502 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 EFNA5P52803 228 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 TFDP1Q14186 410 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 MIIPQ5JXC2 388 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 CDCA2Q69YH5 1023 aaPredicted RBP17.09■□□□□ 0.33
CTSA-202ENST00000354880 FRMD5Q7Z6J6 570 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 MTG1Q9BT17 334 aaPredicted RBP17.09■□□□□ 0.33
CTSA-202ENST00000354880 C2orf40Q9H1Z8 148 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 WBP1LQ9NX94 342 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 IMPACTQ9P2X3 320 aa17.09■□□□□ 0.33
CTSA-202ENST00000354880 DDX20Q9UHI6 824 aaKnown RBP17.09■□□□□ 0.33
CTSA-202ENST00000354880 SIP14410 1827 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 PHLPP2Q6ZVD8 1323 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 HNRNPDLO14979 420 aaKnown RBP17.08■□□□□ 0.33
CTSA-202ENST00000354880 PSMC2P35998 433 aaKnown RBP17.08■□□□□ 0.33
CTSA-202ENST00000354880 CASP4P49662 377 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 UBXN1Q04323 297 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 ARMCX5Q6P1M9 558 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 NFRKBQ6P4R8 1299 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 TRIM59Q8IWR1 403 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 BICD1Q96G01 975 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 CBWD1Q9BRT8 395 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 MKNK1Q9BUB5 465 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 METTL14Q9HCE5 456 aaKnown RBP17.08■□□□□ 0.33
CTSA-202ENST00000354880 ARMCX3Q9UH62 379 aaPredicted RBP17.08■□□□□ 0.33
CTSA-202ENST00000354880 AKT3Q9Y243 479 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 FRMD4BQ9Y2L6 1034 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 PTCH2Q9Y6C5 1203 aa17.08■□□□□ 0.33
CTSA-202ENST00000354880 ANKRD63C9JTQ0 380 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 EXOC3O60645 756 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 PBX1P40424 430 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 VWA3BQ502W6 1294 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 SPECC1LQ69YQ0 1117 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 NLRP4Q96MN2 994 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 MAP7D2Q96T17 732 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 NDST4Q9H3R1 872 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 PCIF1Q9H4Z3 704 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 MBLAC1A4D2B0 266 aaPredicted RBP17.07■□□□□ 0.32
CTSA-202ENST00000354880 CST5P28325 142 aaPredicted RBP17.07■□□□□ 0.32
CTSA-202ENST00000354880 ADSSP30520 456 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 POU5F1BQ06416 359 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 SLC39A4Q6P5W5 647 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 CXCL17Q6UXB2 119 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 CCDC186Q7Z3E2 898 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 FAM186BQ8IYM0 893 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 C7orf31Q8N865 590 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 KLHDC9Q8NEP7 349 aa17.07■□□□□ 0.32
CTSA-202ENST00000354880 PPP1R13LQ8WUF5 828 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms