RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 COPB1P53618 953 aaKnown RBP11.74□□□□□ -0.53
CASP3-201ENST00000308394 SMTNP53814 917 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 PSMC1P62191 440 aaKnown RBP11.74□□□□□ -0.53
CASP3-201ENST00000308394 ADAM9Q13443 819 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 NR1I3Q14994 352 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 EMC2Q15006 297 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 ZCWPW2Q504Y3 356 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 APTXQ7Z2E3 356 aaKnown RBP11.74□□□□□ -0.53
CASP3-201ENST00000308394 SYCP3Q8IZU3 236 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 RSPH9Q9H1X1 276 aaPredicted RBP11.74□□□□□ -0.53
CASP3-201ENST00000308394 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 MYH9P35579 1960 aaKnown RBP11.74□□□□□ -0.53
CASP3-201ENST00000308394 EMSYQ7Z589 1322 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 LRRC10BA6NIK2 292 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 TEX33O43247 280 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 SP3Q02447 781 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 KIF22Q14807 665 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 BMT2Q1RMZ1 405 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 OLFML2BQ68BL8 750 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 PPP4R3CPQ6ZMV5 832 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 ATP8B4Q8TF62 1192 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 TMEM143Q96AN5 459 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 TUBGCP2Q9BSJ2 902 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 POLR3FQ9H1D9 316 aaPredicted RBP11.74□□□□□ -0.53
CASP3-201ENST00000308394 XPNPEP1Q9NQW7 623 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 PDLIM7Q9NR12 457 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 ERAP1Q9NZ08 941 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 GABRQQ9UN88 632 aa11.74□□□□□ -0.53
CASP3-201ENST00000308394 PDXKO00764 312 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 NKRFO15226 690 aaKnown RBP eCLIP11.73□□□□□ -0.53
CASP3-201ENST00000308394 CLIC2O15247 247 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 DYNC1LI2O43237 492 aaPredicted RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 ADCY6O43306 1168 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 LGALS2P05162 132 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 NR2F2P24468 414 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 VEGFBP49765 207 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 SLC26A2P50443 739 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 TBC1D8BQ0IIM8 1120 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 PLCB4Q15147 1175 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 SWT1Q5T5J6 900 aaKnown RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 HAUS6Q7Z4H7 955 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 EMID1Q96A84 441 aaPredicted RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 IFT74Q96LB3 600 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 KIFC3Q9BVG8 833 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 IKZF4Q9H2S9 585 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 DHX33Q9H6R0 707 aaKnown RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 KMT5AQ9NQR1 393 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 TYW1Q9NV66 732 aaKnown RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 TRAF3IP3Q9Y228 551 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 ZNF236Q9UL36 1845 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 WDR81Q562E7 1941 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 CCDC66A2RUB6 948 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 CETN3O15182 167 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 ZNF286BP0CG31 522 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 ZNF865P0CJ78 1059 aaPredicted RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 MAPTP10636 758 aaKnown RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 NPTX2P47972 431 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 FLT3LGP49771 235 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 EDRF1Q3B7T1 1238 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 CCDC40Q4G0X9 1142 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 FOXR2Q6PJQ5 311 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 LRRC55Q6ZSA7 311 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 VSTM4Q8IW00 320 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 NOC4LQ9BVI4 516 aaKnown RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 SEZ6LQ9BYH1 1024 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 SUGCTQ9HAC7 445 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 C17orf75Q9HAS0 396 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 CHCHD3Q9NX63 227 aaKnown RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 PAXBP1Q9Y5B6 917 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 PEX19P40855 299 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 RFC5P40937 340 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 UBXN1Q04323 297 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 TARBP2Q15633 366 aaKnown RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 HS1BP3Q53T59 392 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 HS2ST1Q7LGA3 356 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 BSNDQ8WZ55 320 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 LENG1Q96BZ8 264 aaPredicted RBP11.73□□□□□ -0.53
CASP3-201ENST00000308394 GBP3Q9H0R5 595 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 RNF186Q9NXI6 227 aa11.73□□□□□ -0.53
CASP3-201ENST00000308394 UBE4BO95155 1302 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 TGFB1I1O43294 461 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 MMP3P08254 477 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 RPL13P26373 211 aaKnown RBP11.72□□□□□ -0.53
CASP3-201ENST00000308394 MAP2K2P36507 400 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 NCKAP1LP55160 1127 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 CHMP4BP1P59074 171 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 IGBP1P78318 339 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 PRKCZQ05513 592 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 ALCAMQ13740 583 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 DGKDQ16760 1214 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 SLC17A8Q8NDX2 589 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 TRAPPC12Q8WVT3 735 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 MRRFQ96E11 262 aaKnown RBP11.72□□□□□ -0.53
CASP3-201ENST00000308394 CEP63Q96MT8 703 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 TMEM206Q9H813 350 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 IMPACTQ9P2X3 320 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 MYH11P35749 1972 aa11.72□□□□□ -0.53
CASP3-201ENST00000308394 H0YHG0 523 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms