RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Fgfr4Q03142 799 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 NeblQ0II04 452 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tfb2mQ3TL26 396 aaKnown RBP9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cpa2Q504N0 417 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Zbtb17Q60821 794 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 PapolaQ61183 739 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ptpn21Q62136 1176 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fndc11Q80WB0 326 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tmco5bQ80X59 307 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Disc1Q811T9 852 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Hspbap1Q8BK58 483 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Slc12a8Q8VI23 705 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dcp1aQ91YD3 602 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cdca3Q99M54 266 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Serpinb3bQ9D1Q5 387 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gsdmdc1Q9D8T2 487 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Homer2Q9QWW1 354 aa9.85□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fam81bA0A140LI28 432 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Abcb5B5X0E4 1255 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mmp2P33434 662 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Vars2Q3U2A8 1060 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Map4k2Q61161 821 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Foxb2Q64733 428 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Hook2Q7TMK6 716 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Olfr859Q7TRF5 309 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mrps27Q8BK72 415 aaKnown RBP9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ccdc122Q8BVN0 290 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gpr153Q8K0Z9 631 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Nop14Q8R3N1 860 aaKnown RBP9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 TgdsQ8VDR7 355 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Olfr818Q8VG46 318 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Eif4a3Q91VC3 411 aaKnown RBP9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rnf167Q91XF4 347 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Fam84aQ9D650 292 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mbnl1Q9JKP5 341 aaKnown RBP9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Tyk2Q9R117 1184 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Orc1Q9Z1N2 840 aaKnown RBP9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Zmynd8A2A484 1235 aaKnown RBP9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dhtkd1A2ATU0 921 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ppp2r3aB2RXC8 1150 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gm44503E9PYU5 387 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Scamp3O35609 349 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cd93O89103 644 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Hoxa11P31311 313 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Art5P70352 309 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Zbtb48Q1H9T6 681 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Gbp4Q61107 620 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ppp1r14dQ7TT52 146 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Stkld1Q80YS9 662 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Thap3Q8BJ25 218 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Shisa2Q8QZV2 295 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Ap3m2Q8R2R9 418 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 TxlnbQ8VBT1 685 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Dhcr24Q8VCH6 516 aaKnown RBP9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Klhl20Q8VCK5 604 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Nrbp2Q91V36 499 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 HibadhQ99L13 335 aaKnown RBP9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Mrfap1Q9CQL7 125 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Rtn3Q9ES97 964 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Nr2e3Q9QXZ7 395 aa9.84□□□□□ -0.83
Upf3b-201ENSMUST00000076265 Cetn3O35648 167 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Hoxd13P70217 339 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Nsun2Q1HFZ0 757 aaKnown RBP9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Itih3Q61704 889 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Otud6aQ6IE21 290 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mapk4Q6P5G0 583 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Arhgap10Q6Y5D8 786 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Znf653Q6YND2 615 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Olfr107Q7TRK4 309 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Sez6Q7TSK2 991 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rnf214Q8BFU3 668 aaKnown RBP9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ppm1nQ8BGL1 404 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mzt1Q8BUR9 78 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 9230110C19RikQ8CC70 267 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 AagabQ8R2R3 316 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Prkag2Q91WG5 566 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Aco2Q99KI0 780 aaKnown RBP9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Maged2Q9ER67 616 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Polg2Q9QZM2 459 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ap1m2Q9WVP1 423 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Map3k19E9Q3S4 1311 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mon2Q80TL7 1715 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Mcf2A2AEU1 1111 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Gucy1a2F8VQK3 730 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Eya2O08575 532 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 4933415F23RikQ14BX6 153 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Slfn4Q3UV66 602 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Znf697Q569E7 569 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Myl6Q60605 151 aaKnown RBP9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Klra4Q60651 263 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 CfiQ61129 603 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Krt39Q6IFX4 482 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Adam20Q7M763 760 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Kctd6Q8BNL5 237 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 B130006D01RikQ8BRH6 153 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Slc9a9Q8BZ00 644 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Wdr37Q8CBE3 496 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Saysd1Q8K190 188 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Glis1Q8K1M4 789 aa9.83□□□□□ -0.84
Upf3b-201ENSMUST00000076265 GptQ8QZR5 496 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 124.5 ms