RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A PBP1P53297 722 aaKnown RBP14.15□□□□□ -0.14
TRN1tP(UGG)A TMS1Q12116 473 aa14.15□□□□□ -0.14
TRN1tP(UGG)A SIA1Q12212 622 aa14.15□□□□□ -0.14
TRN1tP(UGG)A RLM1Q12224 676 aa14.15□□□□□ -0.14
TRN1tP(UGG)A HER1Q12276 1246 aa14.15□□□□□ -0.14
TRN1tP(UGG)A SWM1Q12379 170 aa14.15□□□□□ -0.14
TRN1tP(UGG)A MED11Q99278 115 aa14.15□□□□□ -0.14
TRN1tP(UGG)A YFR010W-AP0C5N0 62 aa14.14□□□□□ -0.15
TRN1tP(UGG)A NUP1P20676 1076 aa14.14□□□□□ -0.15
TRN1tP(UGG)A HIS7P33734 552 aaKnown RBP14.14□□□□□ -0.15
TRN1tP(UGG)A GPX1P36014 167 aa14.14□□□□□ -0.15
TRN1tP(UGG)A ZRG8P40021 1076 aa14.14□□□□□ -0.15
TRN1tP(UGG)A REE1P40893 198 aa14.14□□□□□ -0.15
TRN1tP(UGG)A STB1P42845 420 aa14.14□□□□□ -0.15
TRN1tP(UGG)A YJR098CP47139 656 aa14.14□□□□□ -0.15
TRN1tP(UGG)A COQ10Q08058 207 aa14.14□□□□□ -0.15
TRN1tP(UGG)A NTG2Q08214 380 aa14.14□□□□□ -0.15
TRN1tP(UGG)A HNT3Q08702 217 aa14.14□□□□□ -0.15
TRN1tP(UGG)A IDP1P21954 428 aaKnown RBP14.13□□□□□ -0.15
TRN1tP(UGG)A EHD3P28817 500 aa14.13□□□□□ -0.15
TRN1tP(UGG)A YKL071WP36086 256 aa14.13□□□□□ -0.15
TRN1tP(UGG)A APD1P38281 316 aa14.13□□□□□ -0.15
TRN1tP(UGG)A RPP1P38786 293 aa14.13□□□□□ -0.15
TRN1tP(UGG)A CHL4P38907 458 aa14.13□□□□□ -0.15
TRN1tP(UGG)A FET3P38993 636 aa14.13□□□□□ -0.15
TRN1tP(UGG)A NAB3P38996 802 aaKnown RBP RIP-Chip data14.13□□□□□ -0.15not detected
TRN1tP(UGG)A TMA20P89886 181 aaPredicted RBP14.13□□□□□ -0.15
TRN1tP(UGG)A SPO19Q03029 223 aa14.13□□□□□ -0.15
TRN1tP(UGG)A RSA3Q05942 220 aaKnown RBP14.13□□□□□ -0.15
TRN1tP(UGG)A YGK3Q12222 375 aaPredicted RBP14.13□□□□□ -0.15
TRN1tP(UGG)A YBR056W-AI2HB52 66 aa14.12□□□□□ -0.15
TRN1tP(UGG)A HAP4P14064 554 aa14.12□□□□□ -0.15
TRN1tP(UGG)A CTA1P15202 515 aa14.12□□□□□ -0.15
TRN1tP(UGG)A CNA1P23287 553 aa14.12□□□□□ -0.15
TRN1tP(UGG)A TRS65P32893 560 aa14.12□□□□□ -0.15
TRN1tP(UGG)A ECM4P36156 370 aa14.12□□□□□ -0.15
TRN1tP(UGG)A IPT1P38954 527 aa14.12□□□□□ -0.15
TRN1tP(UGG)A RPS26AP39938 119 aaKnown RBP14.12□□□□□ -0.15
TRN1tP(UGG)A RPS26BP39939 119 aaKnown RBP14.12□□□□□ -0.15
TRN1tP(UGG)A AVT6P40074 448 aa14.12□□□□□ -0.15
TRN1tP(UGG)A VNX1P42839 908 aa14.12□□□□□ -0.15
TRN1tP(UGG)A OST6Q03723 332 aa14.12□□□□□ -0.15
TRN1tP(UGG)A YDL177CQ12257 170 aa14.12□□□□□ -0.15
TRN1tP(UGG)A RPB8P20436 146 aa14.11□□□□□ -0.15
TRN1tP(UGG)A NIC96P34077 839 aa14.11□□□□□ -0.15
TRN1tP(UGG)A MRPL16P38064 232 aa14.11□□□□□ -0.15
TRN1tP(UGG)A GDI1P39958 451 aaKnown RBP14.11□□□□□ -0.15
TRN1tP(UGG)A MPP6P53725 186 aaPredicted RBP14.11□□□□□ -0.15
TRN1tP(UGG)A SDC1Q03323 175 aa14.11□□□□□ -0.15
TRN1tP(UGG)A YPQ2Q06328 317 aa14.11□□□□□ -0.15
TRN1tP(UGG)A IRC19Q07843 230 aa14.11□□□□□ -0.15
TRN1tP(UGG)A HRT1Q08273 121 aa14.11□□□□□ -0.15
TRN1tP(UGG)A TRM10Q12400 293 aa14.11□□□□□ -0.15
TRN1tP(UGG)A PRP8P33334 2413 aaKnown RBP14.1□□□□□ -0.15
TRN1tP(UGG)A AIM17P23180 465 aaKnown RBP14.1□□□□□ -0.15
TRN1tP(UGG)A SCO1P23833 295 aa14.1□□□□□ -0.15
TRN1tP(UGG)A ADH7P25377 361 aa14.1□□□□□ -0.15
TRN1tP(UGG)A VPH2P32341 215 aa14.1□□□□□ -0.15
TRN1tP(UGG)A SHO1P40073 367 aa14.1□□□□□ -0.15
TRN1tP(UGG)A SAM37P50110 327 aa14.1□□□□□ -0.15
TRN1tP(UGG)A ATG17Q06410 417 aa14.1□□□□□ -0.15
TRN1tP(UGG)A GSH2Q08220 491 aa14.1□□□□□ -0.15
TRN1tP(UGG)A RDL2Q08742 149 aaKnown RBP14.1□□□□□ -0.15
TRN1tP(UGG)A MET2P08465 486 aa14.09□□□□□ -0.15
TRN1tP(UGG)A YEF1P32622 495 aa14.09□□□□□ -0.15
TRN1tP(UGG)A NAS2P40555 220 aa14.09□□□□□ -0.15
TRN1tP(UGG)A NQM1P53228 333 aaPredicted RBP14.09□□□□□ -0.15
TRN1tP(UGG)A YGR066CP53242 292 aa14.09□□□□□ -0.15
TRN1tP(UGG)A PGA1P53896 198 aa14.09□□□□□ -0.15
TRN1tP(UGG)A UTP21Q06078 939 aaPredicted RBP14.09□□□□□ -0.15
TRN1tP(UGG)A MLC2Q06580 163 aa14.09□□□□□ -0.15
TRN1tP(UGG)A BLM10P43583 2143 aa14.09□□□□□ -0.15
TRN1tP(UGG)A MET17P06106 444 aa14.08□□□□□ -0.16
TRN1tP(UGG)A RPB10P22139 70 aa14.08□□□□□ -0.16
TRN1tP(UGG)A MDH3P32419 343 aaKnown RBP RIP-Chip data14.08□□□□□ -0.16not detected
TRN1tP(UGG)A MSN4P33749 630 aa14.08□□□□□ -0.16
TRN1tP(UGG)A GOS1P38736 223 aa14.08□□□□□ -0.16
TRN1tP(UGG)A PTI1P39927 425 aaPredicted RBP14.08□□□□□ -0.16
TRN1tP(UGG)A YEL057CP39983 233 aa14.08□□□□□ -0.16
TRN1tP(UGG)A NIT2P47016 307 aa14.08□□□□□ -0.16
TRN1tP(UGG)A BUD17P53727 317 aa14.08□□□□□ -0.16
TRN1tP(UGG)A YPL039WQ03080 316 aa14.08□□□□□ -0.16
TRN1tP(UGG)A YLR040CQ07988 224 aa14.08□□□□□ -0.16
TRN1tP(UGG)A YOR343CQ12484 108 aa14.08□□□□□ -0.16
TRN1tP(UGG)A NDC1P32500 655 aa14.07□□□□□ -0.16
TRN1tP(UGG)A YHR035WP38769 630 aa14.07□□□□□ -0.16
TRN1tP(UGG)A KRE29P40026 464 aa14.07□□□□□ -0.16
TRN1tP(UGG)A YIL169CP40442 995 aa14.07□□□□□ -0.16
TRN1tP(UGG)A LYS5P50113 272 aa14.07□□□□□ -0.16
TRN1tP(UGG)A COS10P52924 374 aa14.07□□□□□ -0.16
TRN1tP(UGG)A BRR6P53062 197 aa14.07□□□□□ -0.16
TRN1tP(UGG)A YGR126WP53274 230 aa14.07□□□□□ -0.16
TRN1tP(UGG)A OGG1P53397 376 aaPredicted RBP14.07□□□□□ -0.16
TRN1tP(UGG)A RRN9P53437 365 aa14.07□□□□□ -0.16
TRN1tP(UGG)A FIN1Q03898 291 aa14.07□□□□□ -0.16
TRN1tP(UGG)A YMR087WQ04299 284 aa14.07□□□□□ -0.16
TRN1tP(UGG)A MRPL1Q04599 285 aa14.07□□□□□ -0.16
TRN1tP(UGG)A SET6Q12529 373 aa14.07□□□□□ -0.16
TRN1tP(UGG)A LSO1Q3E827 93 aa14.07□□□□□ -0.16
TRN1tP(UGG)A VCX1Q99385 411 aa14.07□□□□□ -0.16
Retrieved 100 of 5,963 RNA–protein pairs in 124.7 ms