RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C CSE1P33307 960 aa0.29□□□□□ -2.36
NIP1YMR309C PXA2P34230 853 aa0.29□□□□□ -2.36
NIP1YMR309C KTI12P34253 313 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C IST2P38250 946 aa0.29□□□□□ -2.36
NIP1YMR309C SLM1P40485 686 aa0.29□□□□□ -2.36
NIP1YMR309C BUD27P43573 796 aaKnown RBP RIP-Chip data0.29□□□□□ -2.36not detected
NIP1YMR309C MNN5P46982 586 aa0.29□□□□□ -2.36
NIP1YMR309C PEX30Q06169 523 aa0.29□□□□□ -2.36
NIP1YMR309C DXO1Q06349 442 aa0.29□□□□□ -2.36
NIP1YMR309C APC5Q08683 685 aa0.29□□□□□ -2.36
NIP1YMR309C RPN8Q08723 338 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C SPE3Q12074 293 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C SLM3Q12093 417 aa0.29□□□□□ -2.36
NIP1YMR309C SGT2Q12118 346 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C TFC7Q12415 435 aa0.29□□□□□ -2.36
NIP1YMR309C FSH3Q99369 266 aa0.29□□□□□ -2.36
NIP1YMR309C RPL1AP0CX43 217 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C RPL1BP0CX44 217 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C VPS1P21576 704 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C DBR1P24309 405 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C RSA4P25382 515 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C CTM1P38818 585 aa0.29□□□□□ -2.36
NIP1YMR309C ASP1P38986 381 aaPredicted RBP0.29□□□□□ -2.36
NIP1YMR309C SMC2P38989 1170 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C EFM4P40516 257 aa0.29□□□□□ -2.36
NIP1YMR309C DSK2P48510 373 aa0.29□□□□□ -2.36
NIP1YMR309C LSG1P53145 640 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C LST7P53237 242 aa0.29□□□□□ -2.36
NIP1YMR309C SYF2P53277 215 aaPredicted RBP0.29□□□□□ -2.36
NIP1YMR309C RET3P53600 189 aa0.29□□□□□ -2.36
NIP1YMR309C GTO3Q04806 366 aa0.29□□□□□ -2.36
NIP1YMR309C YDR222WQ04925 415 aa0.29□□□□□ -2.36
NIP1YMR309C ECM19Q06011 112 aa0.29□□□□□ -2.36
NIP1YMR309C NOP6Q07623 225 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C RPN5Q12250 445 aaKnown RBP0.29□□□□□ -2.36
NIP1YMR309C ARF2P19146 181 aaKnown RBP0.28□□□□□ -2.36
NIP1YMR309C RPB9P27999 122 aa0.28□□□□□ -2.36
NIP1YMR309C PSO2P30620 661 aa0.28□□□□□ -2.36
NIP1YMR309C ARO4P32449 370 aaKnown RBP0.28□□□□□ -2.36
NIP1YMR309C VAM7P32912 316 aa0.28□□□□□ -2.36
NIP1YMR309C DSE1P40077 573 aa0.28□□□□□ -2.36
NIP1YMR309C YCH1P42937 148 aa0.28□□□□□ -2.36
NIP1YMR309C BAT2P47176 376 aaKnown RBP0.28□□□□□ -2.36
NIP1YMR309C NBP1P52919 319 aaPredicted RBP0.28□□□□□ -2.36
NIP1YMR309C AQR1P53943 586 aa0.28□□□□□ -2.36
NIP1YMR309C SCS7Q03529 384 aa0.28□□□□□ -2.36
NIP1YMR309C YMR310CQ04867 317 aaPredicted RBP0.28□□□□□ -2.36
NIP1YMR309C YPL264CQ08980 353 aa0.28□□□□□ -2.36
NIP1YMR309C HSP82P02829 709 aaKnown RBP0.28□□□□□ -2.36
NIP1YMR309C RPL6BP05739 176 aaKnown RBP0.28□□□□□ -2.36
NIP1YMR309C ATG7P38862 630 aa0.28□□□□□ -2.36
NIP1YMR309C EDC2P40023 145 aaPredicted RBP0.28□□□□□ -2.36
NIP1YMR309C RRG9P40156 214 aa0.28□□□□□ -2.36
NIP1YMR309C YFR045WP43617 309 aa0.28□□□□□ -2.36
NIP1YMR309C YNL040WP53960 456 aaPredicted RBP0.28□□□□□ -2.36
NIP1YMR309C RPL6AQ02326 176 aaKnown RBP0.28□□□□□ -2.36
NIP1YMR309C NAT4Q04751 285 aa0.28□□□□□ -2.36
NIP1YMR309C ARC18Q05933 178 aaKnown RBP0.28□□□□□ -2.36
NIP1YMR309C DIB1Q06819 143 aaPredicted RBP0.28□□□□□ -2.36
NIP1YMR309C RDS3Q06835 107 aaPredicted RBP0.28□□□□□ -2.36
NIP1YMR309C DTD1Q07648 150 aaKnown RBP0.28□□□□□ -2.36
NIP1YMR309C PLB3Q08108 686 aa0.28□□□□□ -2.36
NIP1YMR309C FEX1Q08913 375 aa0.28□□□□□ -2.36
NIP1YMR309C FEX2Q08991 375 aa0.28□□□□□ -2.36
NIP1YMR309C TAF10Q12030 206 aa0.28□□□□□ -2.36
NIP1YMR309C TY3A-GQ12173 290 aa0.28□□□□□ -2.36
NIP1YMR309C TY3A-IQ99219 290 aa0.28□□□□□ -2.36
NIP1YMR309C CBP2P03874 630 aaPredicted RBP0.27□□□□□ -2.37
NIP1YMR309C MAS1P10507 462 aa0.27□□□□□ -2.37
NIP1YMR309C SPS100P13130 326 aa0.27□□□□□ -2.37
NIP1YMR309C YAK1P14680 807 aa0.27□□□□□ -2.37
NIP1YMR309C ERD1P16151 362 aa0.27□□□□□ -2.37
NIP1YMR309C CKI1P20485 582 aa0.27□□□□□ -2.37
NIP1YMR309C FAR1P21268 830 aa0.27□□□□□ -2.37
NIP1YMR309C MNE1P24720 663 aa0.27□□□□□ -2.37
NIP1YMR309C RRT12P25381 491 aa0.27□□□□□ -2.37
NIP1YMR309C HMX1P32339 317 aa0.27□□□□□ -2.37
NIP1YMR309C MEI5P32489 222 aa0.27□□□□□ -2.37
NIP1YMR309C VMA8P32610 256 aaKnown RBP0.27□□□□□ -2.37
NIP1YMR309C YKL187CP34231 750 aa0.27□□□□□ -2.37
NIP1YMR309C MPE1P35728 441 aaKnown RBP0.27□□□□□ -2.37
NIP1YMR309C GDT1P38301 280 aaPredicted RBP0.27□□□□□ -2.37
NIP1YMR309C MLH1P38920 769 aa0.27□□□□□ -2.37
NIP1YMR309C PES4P39684 611 aa0.27□□□□□ -2.37
NIP1YMR309C GDI1P39958 451 aaKnown RBP0.27□□□□□ -2.37
NIP1YMR309C YFH1Q07540 174 aa0.27□□□□□ -2.37
NIP1YMR309C VIK1Q12045 647 aa0.27□□□□□ -2.37
NIP1YMR309C PFK27Q12471 397 aaPredicted RBP0.27□□□□□ -2.37
NIP1YMR309C PAR32Q12515 295 aaKnown RBP0.27□□□□□ -2.37
NIP1YMR309C RGS2Q99188 309 aa0.27□□□□□ -2.37
NIP1YMR309C TDH2P00358 332 aaKnown RBP0.27□□□□□ -2.37
NIP1YMR309C TDH3P00359 332 aaKnown RBP RIP-Chip data0.27□□□□□ -2.37not detected
NIP1YMR309C YLL053CP0CD98 152 aa0.27□□□□□ -2.37
NIP1YMR309C DAP2P18962 818 aa0.27□□□□□ -2.37
NIP1YMR309C RBK1P25332 333 aa0.27□□□□□ -2.37
NIP1YMR309C MXR2P25566 168 aa0.27□□□□□ -2.37
NIP1YMR309C SUR1P33300 382 aa0.27□□□□□ -2.37
NIP1YMR309C MRPS5P33759 307 aa0.27□□□□□ -2.37
NIP1YMR309C CAB3P36076 571 aa0.27□□□□□ -2.37
NIP1YMR309C IML3P38265 245 aa0.27□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms