RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W SMX2P40204 77 aaKnown RBP3.43□□□□□ -1.86
NUP85YJR042W ICE2P40499 491 aa3.43□□□□□ -1.86
NUP85YJR042W YFL064CP43540 174 aa3.43□□□□□ -1.86
NUP85YJR042W AGP3P43548 558 aa3.43□□□□□ -1.86
NUP85YJR042W IRC7P43623 340 aa3.43□□□□□ -1.86
NUP85YJR042W IBA57P47158 497 aa3.43□□□□□ -1.86
NUP85YJR042W GPI15P53961 229 aa3.43□□□□□ -1.86
NUP85YJR042W ASI1P54074 624 aa3.43□□□□□ -1.86
NUP85YJR042W VBA1Q04301 562 aa3.43□□□□□ -1.86
NUP85YJR042W SPC24Q04477 213 aa3.43□□□□□ -1.86
NUP85YJR042W YOR387CQ08910 206 aa3.43□□□□□ -1.86
NUP85YJR042W SIA1Q12212 622 aa3.43□□□□□ -1.86
NUP85YJR042W RIF1P29539 1916 aa3.43□□□□□ -1.86
NUP85YJR042W DSF1P0CX08 502 aa3.43□□□□□ -1.86
NUP85YJR042W YNR073CP0CX09 502 aa3.43□□□□□ -1.86
NUP85YJR042W STE18P18852 110 aa3.43□□□□□ -1.86
NUP85YJR042W SAM2P19358 384 aaKnown RBP3.43□□□□□ -1.86
NUP85YJR042W YSR3P23501 404 aa3.43□□□□□ -1.86
NUP85YJR042W GIT1P25346 518 aa3.43□□□□□ -1.86
NUP85YJR042W ERG9P29704 444 aa3.43□□□□□ -1.86
NUP85YJR042W PDR3P33200 976 aa3.43□□□□□ -1.86
NUP85YJR042W YPT52P36018 234 aaKnown RBP3.43□□□□□ -1.86
NUP85YJR042W HEK2P38199 381 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
NUP85YJR042W MIT1P40002 666 aa3.43□□□□□ -1.86
NUP85YJR042W LYS12P40495 371 aaKnown RBP3.43□□□□□ -1.86
NUP85YJR042W GAB1P41733 394 aa3.43□□□□□ -1.86
NUP85YJR042W PRY1P47032 299 aa3.43□□□□□ -1.86
NUP85YJR042W AMA1P50082 593 aa3.43□□□□□ -1.86
NUP85YJR042W YGL159WP53110 370 aa3.43□□□□□ -1.86
NUP85YJR042W SOL4P53315 255 aa3.43□□□□□ -1.86
NUP85YJR042W SUE1Q06524 206 aa3.43□□□□□ -1.86
NUP85YJR042W TEF1P02994 458 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W NAM2P11325 894 aa3.42□□□□□ -1.86
NUP85YJR042W BAR1P12630 587 aa3.42□□□□□ -1.86
NUP85YJR042W SNF6P18888 332 aa3.42□□□□□ -1.86
NUP85YJR042W RPL24BP24000 155 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W IES6P32617 166 aa3.42□□□□□ -1.86
NUP85YJR042W MRPL6P32904 214 aa3.42□□□□□ -1.86
NUP85YJR042W VPS21P36017 210 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W MRX3P38172 270 aa3.42□□□□□ -1.86
NUP85YJR042W IST2P38250 946 aa3.42□□□□□ -1.86
NUP85YJR042W FES1P38260 290 aa3.42□□□□□ -1.86
NUP85YJR042W AME1P38313 324 aa3.42□□□□□ -1.86
NUP85YJR042W SUR2P38992 349 aa3.42□□□□□ -1.86
NUP85YJR042W PHO90P39535 881 aa3.42□□□□□ -1.86
NUP85YJR042W YIL060WP40519 144 aa3.42□□□□□ -1.86
NUP85YJR042W YIL001WP40560 513 aa3.42□□□□□ -1.86
NUP85YJR042W TDA10P42938 290 aa3.42□□□□□ -1.86
NUP85YJR042W RTT101P47050 842 aa3.42□□□□□ -1.86
NUP85YJR042W ZRG17P53735 605 aa3.42□□□□□ -1.86
NUP85YJR042W COS1P53822 381 aa3.42□□□□□ -1.86
NUP85YJR042W PRP38Q00723 242 aaPredicted RBP3.42□□□□□ -1.86
NUP85YJR042W MSS11Q03825 758 aa3.42□□□□□ -1.86
NUP85YJR042W DLT1Q04216 342 aa3.42□□□□□ -1.86
NUP85YJR042W TAF9Q05027 157 aa3.42□□□□□ -1.86
NUP85YJR042W LDS2Q08218 356 aa3.42□□□□□ -1.86
NUP85YJR042W YOR338WQ99326 363 aa3.42□□□□□ -1.86
NUP85YJR042W FLO11P08640 1367 aa3.42□□□□□ -1.86
NUP85YJR042W TRP4P07285 380 aaPredicted RBP3.42□□□□□ -1.86
NUP85YJR042W HEM1P09950 548 aaPredicted RBP3.42□□□□□ -1.86
NUP85YJR042W POX1P13711 748 aa3.42□□□□□ -1.86
NUP85YJR042W DAL82P21705 255 aa3.42□□□□□ -1.86
NUP85YJR042W KIN3P22209 435 aa3.42□□□□□ -1.86
NUP85YJR042W SAT4P25333 603 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W SKN1P33336 771 aa3.42□□□□□ -1.86
NUP85YJR042W NPT1P39683 429 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W YRB1P41920 201 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W YFL015CP43578 164 aa3.42□□□□□ -1.86
NUP85YJR042W SEH1P53011 349 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W TIM8P57744 87 aa3.42□□□□□ -1.86
NUP85YJR042W YDR387CQ04162 555 aa3.42□□□□□ -1.86
NUP85YJR042W KRE28Q04431 385 aa3.42□□□□□ -1.86
NUP85YJR042W ADH6Q04894 360 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W YMR226CQ05016 267 aaKnown RBP3.42□□□□□ -1.86
NUP85YJR042W THI7Q05998 598 aa3.42□□□□□ -1.86
NUP85YJR042W SEC10Q06245 871 aa3.42□□□□□ -1.86
NUP85YJR042W FRE7Q12333 620 aa3.42□□□□□ -1.86
NUP85YJR042W HTB1P02293 131 aaKnown RBP3.41□□□□□ -1.86
NUP85YJR042W HTB2P02294 131 aa3.41□□□□□ -1.86
NUP85YJR042W DST1P07273 309 aa3.41□□□□□ -1.86
NUP85YJR042W RPL27AP0C2H6 136 aaKnown RBP3.41□□□□□ -1.86
NUP85YJR042W RPL27BP0C2H7 136 aaKnown RBP3.41□□□□□ -1.86
NUP85YJR042W MAK32P23060 363 aa3.41□□□□□ -1.86
NUP85YJR042W DPB2P24482 689 aaPredicted RBP3.41□□□□□ -1.86
NUP85YJR042W TMT1P32643 299 aa3.41□□□□□ -1.86
NUP85YJR042W LIP5P32875 414 aa3.41□□□□□ -1.86
NUP85YJR042W ECM15P35195 104 aa3.41□□□□□ -1.86
NUP85YJR042W POG1P40473 351 aa3.41□□□□□ -1.86
NUP85YJR042W SNZ3P43545 298 aa3.41□□□□□ -1.86
NUP85YJR042W AIM24P47127 394 aa3.41□□□□□ -1.86
NUP85YJR042W COG2P53271 262 aa3.41□□□□□ -1.86
NUP85YJR042W SNZ2P53824 298 aa3.41□□□□□ -1.86
NUP85YJR042W YNL140CP53910 189 aa3.41□□□□□ -1.86
NUP85YJR042W ALG11P53954 548 aaKnown RBP3.41□□□□□ -1.86
NUP85YJR042W YLR224WQ05947 369 aa3.41□□□□□ -1.86
NUP85YJR042W YLR177WQ06251 628 aa3.41□□□□□ -1.86
NUP85YJR042W ESA1Q08649 445 aa3.41□□□□□ -1.86
NUP85YJR042W APC9Q12107 265 aa3.41□□□□□ -1.86
NUP85YJR042W ATG34Q12292 412 aa3.41□□□□□ -1.86
NUP85YJR042W RRI1Q12468 440 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms