RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C REV1P12689 985 aa2.01□□□□□ -2.09
UBR1YGR184C MGR1P25573 417 aa2.01□□□□□ -2.09
UBR1YGR184C YCR100CP25606 316 aa2.01□□□□□ -2.09
UBR1YGR184C CSM1P25651 190 aa2.01□□□□□ -2.09
UBR1YGR184C CUE2P36075 443 aaKnown RBP2.01□□□□□ -2.09
UBR1YGR184C OSH3P38713 996 aaKnown RBP2.01□□□□□ -2.09
UBR1YGR184C YHR177WP38867 453 aa2.01□□□□□ -2.09
UBR1YGR184C ALG8P40351 577 aa2.01□□□□□ -2.09
UBR1YGR184C TIM21P53220 239 aa2.01□□□□□ -2.09
UBR1YGR184C TRM112P53738 135 aaPredicted RBP2.01□□□□□ -2.09
UBR1YGR184C YIF1P53845 314 aaKnown RBP2.01□□□□□ -2.09
UBR1YGR184C SKI8Q02793 397 aaPredicted RBP2.01□□□□□ -2.09
UBR1YGR184C RTN1Q04947 295 aaKnown RBP2.01□□□□□ -2.09
UBR1YGR184C ECM7Q06200 448 aa2.01□□□□□ -2.09
UBR1YGR184C MFG1Q07684 458 aa2.01□□□□□ -2.09
UBR1YGR184C MSH5Q12175 901 aa2.01□□□□□ -2.09
UBR1YGR184C RPS16AP0CX51 143 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C RPS16BP0CX52 143 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C ALK2P32789 676 aaPredicted RBP2□□□□□ -2.09
UBR1YGR184C OMA1P36163 345 aa2□□□□□ -2.09
UBR1YGR184C CUE1P38428 203 aa2□□□□□ -2.09
UBR1YGR184C SMF2P38778 549 aa2□□□□□ -2.09
UBR1YGR184C MST28P39552 234 aa2□□□□□ -2.09
UBR1YGR184C ERV46P39727 415 aa2□□□□□ -2.09
UBR1YGR184C SMP3Q04174 516 aa2□□□□□ -2.09
UBR1YGR184C SNT309Q06091 175 aaPredicted RBP2□□□□□ -2.09
UBR1YGR184C DCN1Q12395 269 aa2□□□□□ -2.09
UBR1YGR184C PCL9Q12477 304 aa2□□□□□ -2.09
UBR1YGR184C TEF1P02994 458 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C CDC33P07260 213 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C PET494P07390 489 aaPredicted RBP2□□□□□ -2.09
UBR1YGR184C CWP1P28319 239 aa2□□□□□ -2.09
UBR1YGR184C TIR2P33890 251 aa2□□□□□ -2.09
UBR1YGR184C RCK2P38623 610 aa2□□□□□ -2.09
UBR1YGR184C COX14P39103 70 aa2□□□□□ -2.09
UBR1YGR184C NAS6P50086 228 aa2□□□□□ -2.09
UBR1YGR184C PEP1P32319 1579 aa2□□□□□ -2.09
UBR1YGR184C RPB5P20434 215 aa2□□□□□ -2.09
UBR1YGR184C PDC2P32896 925 aa2□□□□□ -2.09
UBR1YGR184C UBC6P33296 250 aaPredicted RBP2□□□□□ -2.09
UBR1YGR184C ATG7P38862 630 aa2□□□□□ -2.09
UBR1YGR184C PRP24P49960 444 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C ERG13P54839 491 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C SPR6Q01684 191 aa2□□□□□ -2.09
UBR1YGR184C KIN4Q01919 800 aa2□□□□□ -2.09
UBR1YGR184C TPO3Q06451 622 aa2□□□□□ -2.09
UBR1YGR184C BSC6Q08280 497 aa2□□□□□ -2.09
UBR1YGR184C RSA1Q08932 381 aa2□□□□□ -2.09
UBR1YGR184C RRP42Q12277 265 aaPredicted RBP2□□□□□ -2.09
UBR1YGR184C EDE1P34216 1381 aa2□□□□□ -2.09
UBR1YGR184C POP5P28005 173 aa2□□□□□ -2.09
UBR1YGR184C PEX3P28795 441 aa2□□□□□ -2.09
UBR1YGR184C RPL10P41805 221 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C GUF1P46943 645 aa2□□□□□ -2.09
UBR1YGR184C GWT1P47026 490 aa2□□□□□ -2.09
UBR1YGR184C SEH1P53011 349 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C HCH1P53834 153 aa2□□□□□ -2.09
UBR1YGR184C KTR5P53966 522 aaPredicted RBP2□□□□□ -2.09
UBR1YGR184C YPL062WQ02781 134 aa2□□□□□ -2.09
UBR1YGR184C IRC4Q03036 179 aa2□□□□□ -2.09
UBR1YGR184C RDL2Q08742 149 aaKnown RBP2□□□□□ -2.09
UBR1YGR184C MSL5Q12186 476 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
UBR1YGR184C TIP41Q12199 356 aa2□□□□□ -2.09
UBR1YGR184C CDC25P04821 1589 aa2□□□□□ -2.09
UBR1YGR184C KAR9P32526 644 aa1.99□□□□□ -2.09
UBR1YGR184C MYO3P36006 1272 aa1.99□□□□□ -2.09
UBR1YGR184C YKL162CP36052 402 aa1.99□□□□□ -2.09
UBR1YGR184C RIB5P38145 238 aa1.99□□□□□ -2.09
UBR1YGR184C PFS1P38872 237 aa1.99□□□□□ -2.09
UBR1YGR184C COA1P40452 197 aa1.99□□□□□ -2.09
UBR1YGR184C STB4P50104 949 aa1.99□□□□□ -2.09
UBR1YGR184C YPT32P51996 222 aaKnown RBP1.99□□□□□ -2.09
UBR1YGR184C NUP100Q02629 959 aa1.99□□□□□ -2.09
UBR1YGR184C ASA1Q06822 443 aa1.99□□□□□ -2.09
UBR1YGR184C IRC10Q08118 586 aa1.99□□□□□ -2.09
UBR1YGR184C PDR5P33302 1511 aaKnown RBP1.99□□□□□ -2.09
UBR1YGR184C CDC36P06100 191 aaPredicted RBP1.99□□□□□ -2.09
UBR1YGR184C UTR1P21373 530 aa1.99□□□□□ -2.09
UBR1YGR184C STP2P38704 541 aa1.99□□□□□ -2.09
UBR1YGR184C YPT35P38815 214 aaKnown RBP1.99□□□□□ -2.09
UBR1YGR184C YFL040WP43562 540 aa1.99□□□□□ -2.09
UBR1YGR184C RTC4P53850 401 aa1.99□□□□□ -2.09
UBR1YGR184C ATG2P53855 1592 aa1.99□□□□□ -2.09
UBR1YGR184C YPL014WQ02606 381 aa1.99□□□□□ -2.09
UBR1YGR184C TAF9Q05027 157 aa1.99□□□□□ -2.09
UBR1YGR184C SNU23Q12368 194 aaPredicted RBP1.99□□□□□ -2.09
UBR1YGR184C YLR111WQ12528 110 aa1.99□□□□□ -2.09
UBR1YGR184C PDR11P40550 1411 aa1.99□□□□□ -2.09
UBR1YGR184C ADH2P00331 348 aaKnown RBP1.99□□□□□ -2.09
UBR1YGR184C HOT13P36078 116 aa1.99□□□□□ -2.09
UBR1YGR184C SIM1P40472 476 aa1.99□□□□□ -2.09
UBR1YGR184C AIM24P47127 394 aa1.99□□□□□ -2.09
UBR1YGR184C BIO3P50277 480 aa1.99□□□□□ -2.09
UBR1YGR184C UBC13P52490 153 aa1.99□□□□□ -2.09
UBR1YGR184C POP6P53218 158 aa1.99□□□□□ -2.09
UBR1YGR184C PCP1P53259 346 aa1.99□□□□□ -2.09
UBR1YGR184C BUD32P53323 261 aa1.99□□□□□ -2.09
UBR1YGR184C YDR222WQ04925 415 aa1.99□□□□□ -2.09
UBR1YGR184C YPR064WQ12492 139 aa1.99□□□□□ -2.09
UBR1YGR184C GEP4P38812 185 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms