RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W PRS4P38063 326 aaPredicted RBP5.9□□□□□ -1.47
SNU71YGR013W YCH1P42937 148 aa5.9□□□□□ -1.47
SNU71YGR013W AGP3P43548 558 aa5.9□□□□□ -1.47
SNU71YGR013W TRF5P48561 642 aaKnown RBP5.9□□□□□ -1.47
SNU71YGR013W NOP13P53883 403 aaKnown RBP RIP-Chip data5.9□□□□□ -1.47not detected
SNU71YGR013W SLT2Q00772 484 aa5.9□□□□□ -1.47
SNU71YGR013W YAP7Q08182 245 aa5.9□□□□□ -1.47
SNU71YGR013W SET6Q12529 373 aa5.9□□□□□ -1.47
SNU71YGR013W ZIP1P31111 875 aa5.89□□□□□ -1.47
SNU71YGR013W MCR1P36060 302 aaKnown RBP5.89□□□□□ -1.47
SNU71YGR013W DTR1P38125 572 aa5.89□□□□□ -1.47
SNU71YGR013W LDB7P38210 180 aa5.89□□□□□ -1.47
SNU71YGR013W COA1P40452 197 aa5.89□□□□□ -1.47
SNU71YGR013W YRB2P40517 327 aa5.89□□□□□ -1.47
SNU71YGR013W HIT1P46973 164 aa5.89□□□□□ -1.47
SNU71YGR013W ODC1Q03028 310 aa5.89□□□□□ -1.47
SNU71YGR013W BER1Q06688 274 aaKnown RBP5.89□□□□□ -1.47
SNU71YGR013W ALE1Q08548 619 aa5.89□□□□□ -1.47
SNU71YGR013W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
SNU71YGR013W PET494P07390 489 aaPredicted RBP5.88□□□□□ -1.47
SNU71YGR013W PUT3P25502 979 aaPredicted RBP5.88□□□□□ -1.47
SNU71YGR013W TIP1P27654 210 aaPredicted RBP5.88□□□□□ -1.47
SNU71YGR013W ACP1P32463 125 aa5.88□□□□□ -1.47
SNU71YGR013W MKK1P32490 508 aa5.88□□□□□ -1.47
SNU71YGR013W GPX2P38143 162 aa5.88□□□□□ -1.47
SNU71YGR013W UTP18P40362 594 aaPredicted RBP5.88□□□□□ -1.47
SNU71YGR013W YIR014WP40570 242 aa5.88□□□□□ -1.47
SNU71YGR013W ATP23P53722 227 aa5.88□□□□□ -1.47
SNU71YGR013W YPL080CQ02826 108 aa5.88□□□□□ -1.47
SNU71YGR013W CSM3Q04659 317 aa5.88□□□□□ -1.47
SNU71YGR013W GRS2Q06817 618 aa5.88□□□□□ -1.47
SNU71YGR013W YDL009CQ12210 107 aa5.88□□□□□ -1.47
SNU71YGR013W PGK1P00560 416 aaKnown RBP5.88□□□□□ -1.47
SNU71YGR013W URE2P23202 354 aaKnown RBP5.88□□□□□ -1.47
SNU71YGR013W PBN1P25580 416 aa5.88□□□□□ -1.47
SNU71YGR013W ACB1P31787 87 aa5.88□□□□□ -1.47
SNU71YGR013W YEF1P32622 495 aa5.88□□□□□ -1.47
SNU71YGR013W YNK1P36010 153 aaKnown RBP5.88□□□□□ -1.47
SNU71YGR013W MAL32P38158 584 aa5.88□□□□□ -1.47
SNU71YGR013W YRB1P41920 201 aaKnown RBP5.88□□□□□ -1.47
SNU71YGR013W YPT11P48559 417 aa5.88□□□□□ -1.47
SNU71YGR013W MAL12P53341 584 aa5.88□□□□□ -1.47
SNU71YGR013W BNA7Q04066 261 aa5.88□□□□□ -1.47
SNU71YGR013W TIM18Q08749 192 aa5.88□□□□□ -1.47
SNU71YGR013W TPT1Q12272 230 aaKnown RBP5.88□□□□□ -1.47
SNU71YGR013W POM152P39685 1337 aa5.87□□□□□ -1.47
SNU71YGR013W PAB1P04147 577 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SNU71YGR013W DAL82P21705 255 aa5.87□□□□□ -1.47
SNU71YGR013W RBG1P39729 369 aa5.87□□□□□ -1.47
SNU71YGR013W RIO2P40160 425 aaKnown RBP5.87□□□□□ -1.47
SNU71YGR013W QRI1P43123 477 aaKnown RBP5.87□□□□□ -1.47
SNU71YGR013W GWT1P47026 490 aa5.87□□□□□ -1.47
SNU71YGR013W SED5Q01590 340 aa5.87□□□□□ -1.47
SNU71YGR013W ERP3Q12403 225 aa5.87□□□□□ -1.47
SNU71YGR013W RHO1P06780 209 aaKnown RBP5.86□□□□□ -1.47
SNU71YGR013W VPS1P21576 704 aaKnown RBP5.86□□□□□ -1.47
SNU71YGR013W SWD2P36104 329 aaPredicted RBP5.86□□□□□ -1.47
SNU71YGR013W MOH1P38191 138 aa5.86□□□□□ -1.47
SNU71YGR013W YHR182WP38870 785 aa5.86□□□□□ -1.47
SNU71YGR013W FHL1P39521 936 aa5.86□□□□□ -1.47
SNU71YGR013W YFL040WP43562 540 aa5.86□□□□□ -1.47
SNU71YGR013W KEG1P43614 200 aa5.86□□□□□ -1.47
SNU71YGR013W HAM1P47119 197 aaKnown RBP5.86□□□□□ -1.47
SNU71YGR013W TDA7P53882 636 aaPredicted RBP5.86□□□□□ -1.47
SNU71YGR013W STP1Q00947 519 aa5.86□□□□□ -1.47
SNU71YGR013W ADH6Q04894 360 aaKnown RBP5.86□□□□□ -1.47
SNU71YGR013W ARR2Q06597 130 aa5.86□□□□□ -1.47
SNU71YGR013W GET4Q12125 312 aa5.86□□□□□ -1.47
SNU71YGR013W MSH5Q12175 901 aa5.86□□□□□ -1.47
SNU71YGR013W ATP6P00854 259 aa5.85□□□□□ -1.47
SNU71YGR013W CAP2P13517 287 aa5.85□□□□□ -1.47
SNU71YGR013W COQ1P18900 473 aa5.85□□□□□ -1.47
SNU71YGR013W APA2P22108 325 aa5.85□□□□□ -1.47
SNU71YGR013W SPO11P23179 398 aa5.85□□□□□ -1.47
SNU71YGR013W EXG1P23776 448 aaKnown RBP5.85□□□□□ -1.47
SNU71YGR013W DCC1P25559 380 aa5.85□□□□□ -1.47
SNU71YGR013W PPA2P28239 310 aa5.85□□□□□ -1.47
SNU71YGR013W CUE2P36075 443 aaKnown RBP5.85□□□□□ -1.47
SNU71YGR013W ECM4P36156 370 aa5.85□□□□□ -1.47
SNU71YGR013W GEP4P38812 185 aa5.85□□□□□ -1.47
SNU71YGR013W GUF1P46943 645 aa5.85□□□□□ -1.47
SNU71YGR013W COS1P53822 381 aa5.85□□□□□ -1.47
SNU71YGR013W RTC4P53850 401 aa5.85□□□□□ -1.47
SNU71YGR013W ARO80Q04052 950 aa5.85□□□□□ -1.47
SNU71YGR013W VPS74Q06385 345 aa5.85□□□□□ -1.47
SNU71YGR013W APC9Q12107 265 aa5.85□□□□□ -1.47
SNU71YGR013W YBL111CQ3E7Y5 667 aa5.85□□□□□ -1.47
SNU71YGR013W NHP6BP11633 99 aaKnown RBP5.85□□□□□ -1.47
SNU71YGR013W YPK2P18961 677 aa5.85□□□□□ -1.47
SNU71YGR013W ERG9P29704 444 aa5.85□□□□□ -1.47
SNU71YGR013W SLX1P38324 304 aa5.85□□□□□ -1.47
SNU71YGR013W SMF2P38778 549 aa5.85□□□□□ -1.47
SNU71YGR013W PFS1P38872 237 aa5.85□□□□□ -1.47
SNU71YGR013W YNL181WP53878 407 aa5.85□□□□□ -1.47
SNU71YGR013W ALG11P53954 548 aaKnown RBP5.85□□□□□ -1.47
SNU71YGR013W ZRC1P20107 442 aa5.84□□□□□ -1.47
SNU71YGR013W PTP1P25044 335 aa5.84□□□□□ -1.47
SNU71YGR013W YHK8P38776 514 aa5.84□□□□□ -1.47
SNU71YGR013W RTT101P47050 842 aa5.84□□□□□ -1.47
SNU71YGR013W MRPL50P53724 139 aa5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 94.4 ms