RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YDR089WP38966 869 aa3.02□□□□□ -1.93
PRP18YGR006W YGR018CP53211 109 aa3.02□□□□□ -1.93
PRP18YGR006W PXR1P53335 271 aaPredicted RBP3.02□□□□□ -1.93
PRP18YGR006W TIM11P81449 96 aaPredicted RBP3.02□□□□□ -1.93
PRP18YGR006W MRX11Q03079 207 aa3.02□□□□□ -1.93
PRP18YGR006W ECM11Q04110 302 aa3.02□□□□□ -1.93
PRP18YGR006W STE23Q06010 1027 aa3.02□□□□□ -1.93
PRP18YGR006W RPN8Q08723 338 aaKnown RBP3.02□□□□□ -1.93
PRP18YGR006W YOR376WQ08900 122 aa3.02□□□□□ -1.93
PRP18YGR006W SGT2Q12118 346 aaKnown RBP3.02□□□□□ -1.93
PRP18YGR006W RPN6Q12377 434 aa3.02□□□□□ -1.93
PRP18YGR006W RPL18AP0CX49 186 aaKnown RBP3.01□□□□□ -1.93
PRP18YGR006W RPL18BP0CX50 186 aaKnown RBP3.01□□□□□ -1.93
PRP18YGR006W CTA1P15202 515 aa3.01□□□□□ -1.93
PRP18YGR006W SPS19P32573 292 aaKnown RBP3.01□□□□□ -1.93
PRP18YGR006W PDC2P32896 925 aa3.01□□□□□ -1.93
PRP18YGR006W EFM1P38732 585 aa3.01□□□□□ -1.93
PRP18YGR006W CHL4P38907 458 aa3.01□□□□□ -1.93
PRP18YGR006W END3P39013 349 aa3.01□□□□□ -1.93
PRP18YGR006W UTP25P40498 721 aaKnown RBP3.01□□□□□ -1.93
PRP18YGR006W VEL1P53058 206 aa3.01□□□□□ -1.93
PRP18YGR006W YGR168CP53293 376 aa3.01□□□□□ -1.93
PRP18YGR006W RMI1Q02685 241 aa3.01□□□□□ -1.93
PRP18YGR006W YLR297WQ05899 129 aa3.01□□□□□ -1.93
PRP18YGR006W CCH1P50077 2039 aa3□□□□□ -1.93
PRP18YGR006W STE2D6VTK4 431 aa3□□□□□ -1.93
PRP18YGR006W VPS63O13549 108 aa3□□□□□ -1.93
PRP18YGR006W TPI1P00942 248 aaKnown RBP3□□□□□ -1.93
PRP18YGR006W CBP2P03874 630 aaPredicted RBP3□□□□□ -1.93
PRP18YGR006W GCD2P12754 651 aaPredicted RBP3□□□□□ -1.93
PRP18YGR006W BGL2P15703 313 aaKnown RBP3□□□□□ -1.93
PRP18YGR006W YPS1P32329 569 aa3□□□□□ -1.93
PRP18YGR006W MEI5P32489 222 aa3□□□□□ -1.93
PRP18YGR006W ECM34P38728 170 aa3□□□□□ -1.93
PRP18YGR006W OSW5P40219 148 aa3□□□□□ -1.93
PRP18YGR006W AIM20P40451 204 aa3□□□□□ -1.93
PRP18YGR006W YFL012WP43580 148 aa3□□□□□ -1.93
PRP18YGR006W CAB5Q03941 241 aa3□□□□□ -1.93
PRP18YGR006W FAR10Q06001 478 aa3□□□□□ -1.93
PRP18YGR006W TAF10Q12030 206 aa3□□□□□ -1.93
PRP18YGR006W SLF1Q12034 447 aaKnown RBP3□□□□□ -1.93
PRP18YGR006W SAC3P46674 1301 aa2.99□□□□□ -1.93
PRP18YGR006W RPC40P07703 335 aaKnown RBP2.99□□□□□ -1.93
PRP18YGR006W KTI12P34253 313 aaKnown RBP2.99□□□□□ -1.93
PRP18YGR006W SMP1P38128 452 aa2.99□□□□□ -1.93
PRP18YGR006W RRF1P38771 230 aa2.99□□□□□ -1.93
PRP18YGR006W GGC1P38988 300 aa2.99□□□□□ -1.93
PRP18YGR006W NRM1P53718 249 aa2.99□□□□□ -1.93
PRP18YGR006W SCS7Q03529 384 aa2.99□□□□□ -1.93
PRP18YGR006W DTD1Q07648 150 aaKnown RBP2.99□□□□□ -1.93
PRP18YGR006W MMT2Q08970 484 aa2.99□□□□□ -1.93
PRP18YGR006W YBL111CQ3E7Y5 667 aa2.99□□□□□ -1.93
PRP18YGR006W REP1P03871 373 aa2.98□□□□□ -1.93
PRP18YGR006W PUT4P15380 627 aa2.98□□□□□ -1.93
PRP18YGR006W MSS116P15424 664 aaKnown RBP2.98□□□□□ -1.93
PRP18YGR006W SWC5P38326 303 aa2.98□□□□□ -1.93
PRP18YGR006W INA22P40576 216 aa2.98□□□□□ -1.93
PRP18YGR006W YFR018CP43599 363 aa2.98□□□□□ -1.93
PRP18YGR006W SED5Q01590 340 aa2.98□□□□□ -1.93
PRP18YGR006W YMR111CQ04461 462 aaPredicted RBP2.98□□□□□ -1.93
PRP18YGR006W MDY2Q12285 212 aa2.98□□□□□ -1.93
PRP18YGR006W PRM4Q12498 284 aa2.98□□□□□ -1.93
PRP18YGR006W MHP1P43638 1398 aa2.98□□□□□ -1.93
PRP18YGR006W RPS19AP07280 144 aaKnown RBP2.97□□□□□ -1.93
PRP18YGR006W RPS19BP07281 144 aaPredicted RBP2.97□□□□□ -1.93
PRP18YGR006W IME2P32581 645 aa2.97□□□□□ -1.93
PRP18YGR006W RIB7P33312 244 aa2.97□□□□□ -1.93
PRP18YGR006W TIP20P33891 701 aa2.97□□□□□ -1.93
PRP18YGR006W SMF2P38778 549 aa2.97□□□□□ -1.93
PRP18YGR006W FHL1P39521 936 aa2.97□□□□□ -1.93
PRP18YGR006W RRT13P40042 185 aa2.97□□□□□ -1.93
PRP18YGR006W PCL7P40186 285 aa2.97□□□□□ -1.93
PRP18YGR006W LOH1P47055 219 aa2.97□□□□□ -1.93
PRP18YGR006W FLC3P53121 802 aa2.97□□□□□ -1.93
PRP18YGR006W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
PRP18YGR006W ABZ2Q03266 374 aa2.97□□□□□ -1.93
PRP18YGR006W API2Q04413 109 aa2.97□□□□□ -1.93
PRP18YGR006W MRX9Q07349 420 aaKnown RBP2.97□□□□□ -1.93
PRP18YGR006W RDL2Q08742 149 aaKnown RBP2.97□□□□□ -1.93
PRP18YGR006W QCR6P00127 147 aa2.96□□□□□ -1.94
PRP18YGR006W SAR1P20606 190 aaKnown RBP2.96□□□□□ -1.94
PRP18YGR006W RAD23P32628 398 aaKnown RBP2.96□□□□□ -1.94
PRP18YGR006W MNN9P39107 395 aaKnown RBP2.96□□□□□ -1.94
PRP18YGR006W YER184CP39961 794 aa2.96□□□□□ -1.94
PRP18YGR006W RTT105P40063 208 aa2.96□□□□□ -1.94
PRP18YGR006W HIT1P46973 164 aa2.96□□□□□ -1.94
PRP18YGR006W IRC4Q03036 179 aa2.96□□□□□ -1.94
PRP18YGR006W PIN3Q06449 215 aa2.96□□□□□ -1.94
PRP18YGR006W YLR012CQ07927 99 aa2.96□□□□□ -1.94
PRP18YGR006W YPR1Q12458 312 aa2.96□□□□□ -1.94
PRP18YGR006W SAL1D6W196 494 aa2.95□□□□□ -1.94
PRP18YGR006W BUD2P33314 1104 aa2.95□□□□□ -1.94
PRP18YGR006W CBF5P33322 483 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
PRP18YGR006W YHR035WP38769 630 aa2.95□□□□□ -1.94
PRP18YGR006W PMT4P46971 762 aa2.95□□□□□ -1.94
PRP18YGR006W RIB4P50861 169 aaPredicted RBP2.95□□□□□ -1.94
PRP18YGR006W VOA1P53262 265 aa2.95□□□□□ -1.94
PRP18YGR006W UBX2Q04228 584 aa2.95□□□□□ -1.94
PRP18YGR006W RNH1Q04740 348 aa2.95□□□□□ -1.94
PRP18YGR006W YPR172WQ06608 200 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms