RNA–Protein interactions for RNA: YGL166W

CUP2, Transcript of Copper-binding transcription factor, yeastyeast

Gene CUP2, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP2YGL166W SOK2P53438 785 aaPredicted RBP5.7□□□□□ -1.5
CUP2YGL166W KAP120Q02932 1032 aa5.7□□□□□ -1.5
CUP2YGL166W MRP51Q02950 344 aa5.7□□□□□ -1.5
CUP2YGL166W SCS7Q03529 384 aa5.7□□□□□ -1.5
CUP2YGL166W SNO4Q04902 237 aa5.7□□□□□ -1.5
CUP2YGL166W COQ11Q05892 277 aa5.7□□□□□ -1.5
CUP2YGL166W RAF1Q06891 181 aa5.7□□□□□ -1.5
CUP2YGL166W DTD1Q07648 150 aaKnown RBP5.7□□□□□ -1.5
CUP2YGL166W COQ10Q08058 207 aa5.7□□□□□ -1.5
CUP2YGL166W HRT1Q08273 121 aa5.7□□□□□ -1.5
CUP2YGL166W HSP33Q08914 237 aaKnown RBP5.7□□□□□ -1.5
CUP2YGL166W HSP32Q08992 237 aa5.7□□□□□ -1.5
CUP2YGL166W RLM1Q12224 676 aa5.7□□□□□ -1.5
CUP2YGL166W YLR126CQ12288 251 aa5.7□□□□□ -1.5
CUP2YGL166W YOR343CQ12484 108 aa5.7□□□□□ -1.5
CUP2YGL166W CDC36P06100 191 aaPredicted RBP5.69□□□□□ -1.5
CUP2YGL166W RHO1P06780 209 aaKnown RBP5.69□□□□□ -1.5
CUP2YGL166W RPC40P07703 335 aaKnown RBP5.69□□□□□ -1.5
CUP2YGL166W TFS1P14306 219 aa5.69□□□□□ -1.5
CUP2YGL166W NUP1P20676 1076 aa5.69□□□□□ -1.5
CUP2YGL166W UBC8P28263 218 aa5.69□□□□□ -1.5
CUP2YGL166W PRE2P30656 287 aaKnown RBP5.69□□□□□ -1.5
CUP2YGL166W ASF2P32448 525 aaPredicted RBP5.69□□□□□ -1.5
CUP2YGL166W GPX1P36014 167 aa5.69□□□□□ -1.5
CUP2YGL166W MRPL39P36533 70 aa5.69□□□□□ -1.5
CUP2YGL166W CHK1P38147 527 aa5.69□□□□□ -1.5
CUP2YGL166W MTC6P38849 526 aa5.69□□□□□ -1.5
CUP2YGL166W GPP1P41277 250 aaKnown RBP5.69□□□□□ -1.5
CUP2YGL166W MRK1P50873 501 aa5.69□□□□□ -1.5
CUP2YGL166W DML1Q03652 475 aa5.69□□□□□ -1.5
CUP2YGL166W VBA4Q04602 768 aaKnown RBP5.69□□□□□ -1.5
CUP2YGL166W UTP21Q06078 939 aaPredicted RBP5.69□□□□□ -1.5
CUP2YGL166W YPR127WQ06494 345 aa5.69□□□□□ -1.5
CUP2YGL166W NDL1Q06568 189 aa5.69□□□□□ -1.5
CUP2YGL166W NFI1Q12216 726 aa5.69□□□□□ -1.5
CUP2YGL166W YDL180WQ12301 547 aa5.69□□□□□ -1.5
CUP2YGL166W PEP4P07267 405 aaKnown RBP5.68□□□□□ -1.5
CUP2YGL166W TRS65P32893 560 aa5.68□□□□□ -1.5
CUP2YGL166W SOF1P33750 489 aaKnown RBP5.68□□□□□ -1.5
CUP2YGL166W SEN34P39707 275 aa5.68□□□□□ -1.5
CUP2YGL166W NAS2P40555 220 aa5.68□□□□□ -1.5
CUP2YGL166W IDP2P41939 412 aa5.68□□□□□ -1.5
CUP2YGL166W YGL235WP53071 178 aa5.68□□□□□ -1.5
CUP2YGL166W COS1P53822 381 aa5.68□□□□□ -1.5
CUP2YGL166W ELA1P53861 379 aaPredicted RBP5.68□□□□□ -1.5
CUP2YGL166W HMO1Q03973 246 aaKnown RBP5.68□□□□□ -1.5
CUP2YGL166W YPR147CQ06522 304 aaKnown RBP5.68□□□□□ -1.5
CUP2YGL166W YDL176WQ12027 708 aa5.68□□□□□ -1.5
CUP2YGL166W VIK1Q12045 647 aa5.68□□□□□ -1.5
CUP2YGL166W SPC3Q12133 184 aa5.68□□□□□ -1.5
CUP2YGL166W YPR015CQ12531 247 aa5.68□□□□□ -1.5
CUP2YGL166W YDL007C-AQ2V2Q0 85 aa5.68□□□□□ -1.5
CUP2YGL166W SNF4P12904 322 aa5.67□□□□□ -1.5
CUP2YGL166W SNF6P18888 332 aa5.67□□□□□ -1.5
CUP2YGL166W GAS1P22146 559 aaKnown RBP5.67□□□□□ -1.5
CUP2YGL166W RPI1P23250 407 aaKnown RBP5.67□□□□□ -1.5
CUP2YGL166W DBP2P24783 546 aaKnown RBP5.67□□□□□ -1.5
CUP2YGL166W MCM10P32354 571 aa5.67□□□□□ -1.5
CUP2YGL166W MTR2P34232 184 aaKnown RBP5.67□□□□□ -1.5
CUP2YGL166W YKL071WP36086 256 aa5.67□□□□□ -1.5
CUP2YGL166W MRPL16P38064 232 aa5.67□□□□□ -1.5
CUP2YGL166W RPS20P38701 121 aaKnown RBP5.67□□□□□ -1.5
CUP2YGL166W RPP1P38786 293 aa5.67□□□□□ -1.5
CUP2YGL166W NAB3P38996 802 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
CUP2YGL166W YAR028WP39548 234 aa5.67□□□□□ -1.5
CUP2YGL166W FAR7P43592 221 aa5.67□□□□□ -1.5
CUP2YGL166W PRM8P53174 237 aa5.67□□□□□ -1.5
CUP2YGL166W MPP6P53725 186 aaPredicted RBP5.67□□□□□ -1.5
CUP2YGL166W TFB3Q03290 321 aa5.67□□□□□ -1.5
CUP2YGL166W SEC13Q04491 297 aaKnown RBP5.67□□□□□ -1.5
CUP2YGL166W SNT309Q06091 175 aaPredicted RBP5.67□□□□□ -1.5
CUP2YGL166W GRE1Q08969 168 aa5.67□□□□□ -1.5
CUP2YGL166W HMS1Q12398 434 aa5.67□□□□□ -1.5
CUP2YGL166W APC2Q12440 853 aa5.67□□□□□ -1.5
CUP2YGL166W MHF1Q3E835 90 aa5.67□□□□□ -1.5
CUP2YGL166W CAR2P07991 424 aaKnown RBP5.66□□□□□ -1.5
CUP2YGL166W BUD5P25300 642 aaPredicted RBP5.66□□□□□ -1.5
CUP2YGL166W GIT1P25346 518 aa5.66□□□□□ -1.5
CUP2YGL166W RRP7P25368 297 aaPredicted RBP5.66□□□□□ -1.5
CUP2YGL166W MIA40P36046 403 aa5.66□□□□□ -1.5
CUP2YGL166W RTC2P38279 296 aa5.66□□□□□ -1.5
CUP2YGL166W YGP1P38616 354 aaKnown RBP5.66□□□□□ -1.5
CUP2YGL166W ARN2P38724 620 aa5.66□□□□□ -1.5
CUP2YGL166W ALP1P38971 573 aa5.66□□□□□ -1.5
CUP2YGL166W YMR144WP40214 342 aaKnown RBP5.66□□□□□ -1.5
CUP2YGL166W VHR1P40522 640 aa5.66□□□□□ -1.5
CUP2YGL166W YJR098CP47139 656 aa5.66□□□□□ -1.5
CUP2YGL166W HMS2P47175 358 aa5.66□□□□□ -1.5
CUP2YGL166W PCP1P53259 346 aa5.66□□□□□ -1.5
CUP2YGL166W ASI2P53895 289 aa5.66□□□□□ -1.5
CUP2YGL166W YDR102CQ03864 110 aa5.66□□□□□ -1.5
CUP2YGL166W RSM24Q03976 319 aa5.66□□□□□ -1.5
CUP2YGL166W YMR226CQ05016 267 aaKnown RBP5.66□□□□□ -1.5
CUP2YGL166W UIP4Q08926 304 aa5.66□□□□□ -1.5
CUP2YGL166W NIP7Q08962 181 aaKnown RBP5.66□□□□□ -1.5
CUP2YGL166W RTC5Q12108 567 aaKnown RBP5.66□□□□□ -1.5
CUP2YGL166W SET6Q12529 373 aa5.66□□□□□ -1.5
CUP2YGL166W YHR214C-EQ8TGK0 99 aa5.66□□□□□ -1.5
CUP2YGL166W SEC12P11655 471 aa5.65□□□□□ -1.5
CUP2YGL166W MDH3P32419 343 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms