RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	SPC3	Q12133	184 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	YDL007C-A	Q2V2Q0	85 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	PHO2	P07269	559 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	ERD1	P16151	362 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	TIM12	P32830	109 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	MDL1	P33310	695 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	DHR2	P36009	735 aa	Predicted RBP	5.86	□□□□□ -1.47
VMA3	YEL027W	MAE1	P36013	669 aa	Known RBP	5.86	□□□□□ -1.47
VMA3	YEL027W	GPX1	P36014	167 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	YKR073C	P36153	106 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	MTC4	P38335	694 aa	Known RBP	5.86	□□□□□ -1.47
VMA3	YEL027W	RPS20	P38701	121 aa	Known RBP	5.86	□□□□□ -1.47
VMA3	YEL027W	SKN7	P38889	622 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	HXT9	P40885	567 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	ECL1	P48235	211 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	SHE4	P51534	789 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	YGR054W	P53235	642 aa	Known RBP	5.86	□□□□□ -1.47
VMA3	YEL027W	HXT11	P54862	567 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	PFA5	Q03289	374 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	EKI1	Q03764	534 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	YDR249C	Q03787	373 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	SNT309	Q06091	175 aa	Predicted RBP	5.86	□□□□□ -1.47
VMA3	YEL027W	AVO1	Q08236	1176 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	ENB1	Q08299	606 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	SIA1	Q12212	622 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	PRS5	Q12265	496 aa	Known RBP	5.86	□□□□□ -1.47
VMA3	YEL027W	TRM10	Q12400	293 aa		5.86	□□□□□ -1.47
VMA3	YEL027W	MET17	P06106	444 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	HAP4	P14064	554 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	PRP28	P23394	588 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	ERG8	P24521	451 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	VMA6	P32366	345 aa	Known RBP	5.85	□□□□□ -1.47
VMA3	YEL027W	TRS65	P32893	560 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	SLC1	P33333	303 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	HIS7	P33734	552 aa	Known RBP	5.85	□□□□□ -1.47
VMA3	YEL027W	UTP11	P34247	250 aa	Predicted RBP	5.85	□□□□□ -1.47
VMA3	YEL027W	JEN1	P36035	616 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.85	□□□□□ -1.47	not detected
VMA3	YEL027W	APE4	P38821	490 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	AVT6	P40074	448 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	PKP1	P40530	394 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	ECO1	P43605	281 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	RBG2	P53295	368 aa	Known RBP	5.85	□□□□□ -1.47
VMA3	YEL027W	PBP1	P53297	722 aa	Known RBP	5.85	□□□□□ -1.47
VMA3	YEL027W	BSC5	P53755	489 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	PDR16	P53860	351 aa	Known RBP	5.85	□□□□□ -1.47
VMA3	YEL027W	GRX5	Q02784	150 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	ARP10	Q04549	284 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	RNH1	Q04740	348 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	ELP6	Q04868	273 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	SNO4	Q04902	237 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	BUR2	Q05949	395 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	UTP21	Q06078	939 aa	Predicted RBP	5.85	□□□□□ -1.47
VMA3	YEL027W	YPQ2	Q06328	317 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	NTG2	Q08214	380 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	HSP33	Q08914	237 aa	Known RBP	5.85	□□□□□ -1.47
VMA3	YEL027W	HSP32	Q08992	237 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	YDL109C	Q12103	647 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	YRM1	Q12340	786 aa		5.85	□□□□□ -1.47
VMA3	YEL027W	YPK2	P18961	677 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	IDP1	P21954	428 aa	Known RBP	5.84	□□□□□ -1.47
VMA3	YEL027W	CLB2	P24869	491 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	HSP30	P25619	332 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	CHL4	P38907	458 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
VMA3	YEL027W	ZRG8	P40021	1076 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	KRE29	P40026	464 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	YNL208W	P40159	199 aa	Known RBP	5.84	□□□□□ -1.47
VMA3	YEL027W	YFR054C	P43622	192 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	BPL1	P48445	690 aa	Predicted RBP	5.84	□□□□□ -1.47
VMA3	YEL027W	RPN14	P53196	417 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	BUD9	P53226	547 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	YNR062C	P53748	327 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	TIM11	P81449	96 aa	Predicted RBP	5.84	□□□□□ -1.47
VMA3	YEL027W	SNZ1	Q03148	297 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	DML1	Q03652	475 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	OST6	Q03723	332 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	PLM2	Q04383	521 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	MLC2	Q06580	163 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	RRG7	Q08774	242 aa	Predicted RBP	5.84	□□□□□ -1.47
VMA3	YEL027W	YOR289W	Q12012	251 aa	Predicted RBP	5.84	□□□□□ -1.47
VMA3	YEL027W	LSO1	Q3E827	93 aa		5.84	□□□□□ -1.47
VMA3	YEL027W	ENA1	P13587	1091 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	NUP1	P20676	1076 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	RPS5	P26783	225 aa	Known RBP	5.83	□□□□□ -1.48
VMA3	YEL027W	EHD3	P28817	500 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	MSN4	P33749	630 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	NIC96	P34077	839 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	TPO5	P36029	618 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	YKL071W	P36086	256 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	RTC2	P38279	296 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	YHR180W	P38868	163 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	MDM31	P38880	579 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	BUR6	P40096	142 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	NTA1	P40354	457 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	SYG1	P40528	902 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	QRI7	P43122	407 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	RPE1	P46969	238 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	COS10	P52924	374 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	NQM1	P53228	333 aa	Predicted RBP	5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms