RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W NAB2P32505 525 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
NUP84YDL116W MTH1P35198 433 aa6.5□□□□□ -1.37
NUP84YDL116W YBR063CP38083 404 aa6.5□□□□□ -1.37
NUP84YDL116W SAF1P38352 637 aa6.5□□□□□ -1.37
NUP84YDL116W TIF11P38912 153 aaKnown RBP6.5□□□□□ -1.37
NUP84YDL116W MSS4P38994 779 aa6.5□□□□□ -1.37
NUP84YDL116W BTT1P40314 149 aaPredicted RBP6.5□□□□□ -1.37
NUP84YDL116W VNX1P42839 908 aa6.5□□□□□ -1.37
NUP84YDL116W AAD10P47182 288 aa6.5□□□□□ -1.37
NUP84YDL116W NPY1P53164 384 aa6.5□□□□□ -1.37
NUP84YDL116W VOA1P53262 265 aa6.5□□□□□ -1.37
NUP84YDL116W AIM36Q03798 255 aa6.5□□□□□ -1.37
NUP84YDL116W YLR283WQ05867 314 aa6.5□□□□□ -1.37
NUP84YDL116W YEH1Q07804 573 aa6.5□□□□□ -1.37
NUP84YDL116W YLR422WQ06409 1932 aa6.5□□□□□ -1.37
NUP84YDL116W GAL1P04385 528 aa6.5□□□□□ -1.37
NUP84YDL116W CDC23P16522 626 aa6.5□□□□□ -1.37
NUP84YDL116W MAG1P22134 296 aaKnown RBP6.5□□□□□ -1.37
NUP84YDL116W CNB1P25296 175 aa6.5□□□□□ -1.37
NUP84YDL116W MTC7P32633 139 aa6.5□□□□□ -1.37
NUP84YDL116W MRT4P33201 236 aaKnown RBP6.5□□□□□ -1.37
NUP84YDL116W LOT5P34234 306 aa6.5□□□□□ -1.37
NUP84YDL116W FLO10P36170 1169 aa6.5□□□□□ -1.37
NUP84YDL116W AIM46P38885 310 aa6.5□□□□□ -1.37
NUP84YDL116W TED1P40533 473 aa6.5□□□□□ -1.37
NUP84YDL116W YHC3P47040 408 aa6.5□□□□□ -1.37
NUP84YDL116W TAD2P47058 250 aa6.5□□□□□ -1.37
NUP84YDL116W SPT20P50875 604 aa6.5□□□□□ -1.37
NUP84YDL116W HOS2P53096 452 aaPredicted RBP6.5□□□□□ -1.37
NUP84YDL116W YGR042WP53227 271 aa6.5□□□□□ -1.37
NUP84YDL116W GOR1P53839 350 aa6.5□□□□□ -1.37
NUP84YDL116W BUD25P85052 153 aa6.5□□□□□ -1.37
NUP84YDL116W YMR178WQ03219 274 aaKnown RBP6.5□□□□□ -1.37
NUP84YDL116W YDR514CQ04408 483 aa6.5□□□□□ -1.37
NUP84YDL116W YLR257WQ06146 321 aaKnown RBP6.5□□□□□ -1.37
NUP84YDL116W INP53Q12271 1107 aa6.5□□□□□ -1.37
NUP84YDL116W YOR012WQ12351 137 aa6.5□□□□□ -1.37
NUP84YDL116W HBN1Q96VH4 193 aa6.5□□□□□ -1.37
NUP84YDL116W COX3P00420 269 aa6.49□□□□□ -1.37
NUP84YDL116W GCN4P03069 281 aa6.49□□□□□ -1.37
NUP84YDL116W RPL3P14126 387 aaKnown RBP6.49□□□□□ -1.37
NUP84YDL116W FUS3P16892 353 aaKnown RBP6.49□□□□□ -1.37
NUP84YDL116W PPH22P23595 377 aa6.49□□□□□ -1.37
NUP84YDL116W SSH4P32343 579 aa6.49□□□□□ -1.37
NUP84YDL116W MRP20P32387 263 aa6.49□□□□□ -1.37
NUP84YDL116W PET127P32606 800 aa6.49□□□□□ -1.37
NUP84YDL116W GMH1P36125 273 aa6.49□□□□□ -1.37
NUP84YDL116W UIP5P36137 443 aa6.49□□□□□ -1.37
NUP84YDL116W DBP8P38719 431 aa6.49□□□□□ -1.37
NUP84YDL116W PTI1P39927 425 aaPredicted RBP6.49□□□□□ -1.37
NUP84YDL116W DPB11P47027 764 aaPredicted RBP6.49□□□□□ -1.37
NUP84YDL116W SAY1P53324 424 aa6.49□□□□□ -1.37
NUP84YDL116W TIM44Q01852 431 aa6.49□□□□□ -1.37
NUP84YDL116W MRPS16Q02608 121 aa6.49□□□□□ -1.37
NUP84YDL116W SSY1Q03770 852 aa6.49□□□□□ -1.37
NUP84YDL116W SIZ1Q04195 904 aa6.49□□□□□ -1.37
NUP84YDL116W ARG7Q04728 441 aa6.49□□□□□ -1.37
NUP84YDL116W BOP2Q06150 570 aa6.49□□□□□ -1.37
NUP84YDL116W GUP2Q08929 609 aa6.49□□□□□ -1.37
NUP84YDL116W FMP40Q08968 688 aaPredicted RBP6.49□□□□□ -1.37
NUP84YDL116W YPL272CQ08984 517 aa6.49□□□□□ -1.37
NUP84YDL116W YPL066WQ12194 479 aa6.49□□□□□ -1.37
NUP84YDL116W APA1P16550 321 aaKnown RBP6.48□□□□□ -1.37
NUP84YDL116W ERD2P18414 219 aa6.48□□□□□ -1.37
NUP84YDL116W PDR3P33200 976 aa6.48□□□□□ -1.37
NUP84YDL116W SHE2P36068 246 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
NUP84YDL116W RPF2P36160 344 aaKnown RBP6.48□□□□□ -1.37
NUP84YDL116W BUR6P40096 142 aa6.48□□□□□ -1.37
NUP84YDL116W AIM25P47140 327 aa6.48□□□□□ -1.37
NUP84YDL116W MCM22P47167 239 aa6.48□□□□□ -1.37
NUP84YDL116W SWC4P53201 476 aa6.48□□□□□ -1.37
NUP84YDL116W PRM1P53835 661 aa6.48□□□□□ -1.37
NUP84YDL116W NUP116Q02630 1113 aa6.48□□□□□ -1.37
NUP84YDL116W PRM15Q03262 622 aa6.48□□□□□ -1.37
NUP84YDL116W INP1Q03694 420 aa6.48□□□□□ -1.37
NUP84YDL116W CTK1Q03957 528 aaKnown RBP6.48□□□□□ -1.37
NUP84YDL116W YOR365CQ08844 703 aa6.48□□□□□ -1.37
NUP84YDL116W YBL029C-AQ3E756 94 aa6.48□□□□□ -1.37
NUP84YDL116W PDA1P16387 420 aaKnown RBP6.48□□□□□ -1.37
NUP84YDL116W EXG1P23776 448 aaKnown RBP6.48□□□□□ -1.37
NUP84YDL116W RTG1P32607 177 aa6.48□□□□□ -1.37
NUP84YDL116W ANR2P36090 516 aaPredicted RBP6.48□□□□□ -1.37
NUP84YDL116W THI2P38141 450 aa6.48□□□□□ -1.37
NUP84YDL116W BNA4P38169 460 aa6.48□□□□□ -1.37
NUP84YDL116W LAG1P38703 411 aa6.48□□□□□ -1.37
NUP84YDL116W MEP1P40260 492 aa6.48□□□□□ -1.37
NUP84YDL116W SDP1P40479 209 aa6.48□□□□□ -1.37
NUP84YDL116W APQ12P40532 138 aa6.48□□□□□ -1.37
NUP84YDL116W POP6P53218 158 aa6.48□□□□□ -1.37
NUP84YDL116W ROT1Q03691 256 aa6.48□□□□□ -1.37
NUP84YDL116W VHS1Q03785 461 aa6.48□□□□□ -1.37
NUP84YDL116W MTQ2Q03920 221 aaPredicted RBP6.48□□□□□ -1.37
NUP84YDL116W YDL129WQ07555 291 aa6.48□□□□□ -1.37
NUP84YDL116W RRP40Q08285 240 aaKnown RBP6.48□□□□□ -1.37
NUP84YDL116W SCP1Q08873 200 aa6.48□□□□□ -1.37
NUP84YDL116W MRP2P10663 115 aaPredicted RBP6.47□□□□□ -1.37
NUP84YDL116W CPR2P23285 205 aa6.47□□□□□ -1.37
NUP84YDL116W TIP1P27654 210 aaPredicted RBP6.47□□□□□ -1.37
NUP84YDL116W YMC1P32331 307 aa6.47□□□□□ -1.37
NUP84YDL116W APL3P38065 1025 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms