RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KAT5Q92993 513 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 AGPAT3Q9NRZ7 376 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 DAAM1Q9Y4D1 1078 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 SBF2Q86WG5 1849 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 CCDC188H7C350 402 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 IFNAR2P48551 515 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 STAT2P52630 851 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 JAM2P57087 298 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 PHLDB3Q6NSJ2 640 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 FOXR2Q6PJQ5 311 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 NSMFQ6X4W1 530 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 MIGA2Q7L4E1 593 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 TMC3Q7Z5M5 1100 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 CPNE8Q86YQ8 564 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 ZSWIM2Q8NEG5 633 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 KRT35Q92764 455 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 CCDC127Q96BQ5 260 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 CCDC114Q96M63 670 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 FBXO28Q9NVF7 368 aa15.81■□□□□ 0.12
SCARB2-221ENST00000640341 SUCLA2Q9P2R7 463 aaPredicted RBP15.81■□□□□ 0.12
SCARB2-221ENST00000640341 GMNCA6NCL1 334 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 CAND2O75155 1236 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 FTLP02792 175 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-221ENST00000640341 LMNB1P20700 586 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 GUCY2CP25092 1073 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 OTOP1Q7RTM1 612 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 DNAJC17Q9NVM6 304 aaKnown RBP15.8■□□□□ 0.12
SCARB2-221ENST00000640341 COG5Q9UP83 839 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 MYH4Q9Y623 1939 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 HGSO14964 777 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-221ENST00000640341 FAM107AO95990 144 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 ADRA2BP18089 450 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 KCNJ1P48048 391 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 UBAP2Q5T6F2 1119 aaKnown RBP15.8■□□□□ 0.12
SCARB2-221ENST00000640341 LXNQ9BS40 222 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 STK33Q9BYT3 514 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 EMSYQ7Z589 1322 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 PPP2R2AP63151 447 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 CCDC38Q502W7 563 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 PPM1KQ8N3J5 372 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 FBXO25Q8TCJ0 367 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 FAM84AQ96KN4 292 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 GJD4Q96KN9 370 aaPredicted RBP15.8■□□□□ 0.12
SCARB2-221ENST00000640341 APEX2Q9UBZ4 518 aa15.8■□□□□ 0.12
SCARB2-221ENST00000640341 TBX3O15119 743 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 HIP1RO75146 1068 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 C1orf186Q6ZWK4 172 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 ZNF720Q7Z2F6 126 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 ZC3H3Q8IXZ2 948 aaKnown RBP15.79■□□□□ 0.12
SCARB2-221ENST00000640341 CPXCR1Q8N123 301 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 HES6Q96HZ4 224 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 CALR3Q96L12 384 aaKnown RBP15.79■□□□□ 0.12
SCARB2-221ENST00000640341 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.79■□□□□ 0.12
SCARB2-221ENST00000640341 ALG6Q9Y672 507 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 ZMYM2Q9UBW7 1377 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 SMCHD1A6NHR9 2005 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 A6NNZ2 444 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 H0YGN5 161 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 SLC16A3O15427 465 aaKnown RBP15.79■□□□□ 0.12
SCARB2-221ENST00000640341 CTNND1O60716 968 aaKnown RBP15.79■□□□□ 0.12
SCARB2-221ENST00000640341 CALCAP01258 141 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 MMP10P09238 476 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 FGFR4P22455 802 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 TUBB8Q3ZCM7 444 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 KIAA1755Q5JYT7 1200 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 CD302Q8IX05 232 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 IPO4Q8TEX9 1081 aaKnown RBP15.79■□□□□ 0.12
SCARB2-221ENST00000640341 RAPGEF5Q92565 580 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 HSD17B14Q9BPX1 270 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 NFS1Q9Y697 457 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 NRAPQ86VF7 1730 aa15.79■□□□□ 0.12
SCARB2-221ENST00000640341 AHDC1Q5TGY3 1603 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-221ENST00000640341 POLR2MP0CAP2 368 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 AOC3Q16853 763 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 MGARPQ8TDB4 240 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 CRYGNQ8WXF5 182 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 PRMT6Q96LA8 375 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-221ENST00000640341 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 MBOAT7Q96N66 472 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 CBWD1Q9BRT8 395 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 VEZTQ9HBM0 779 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 ECE2O60344 883 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 GAP43P17677 238 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 HOXA7P31268 230 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-221ENST00000640341 MTMR3Q13615 1198 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 KCNV1Q6PIU1 500 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 CCDC105Q8IYK2 499 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 RPUSD2Q8IZ73 545 aaKnown RBP15.78■□□□□ 0.12
SCARB2-221ENST00000640341 UNC45AQ9H3U1 944 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 DDX20Q9UHI6 824 aaKnown RBP15.78■□□□□ 0.12
SCARB2-221ENST00000640341 SUGT1Q9Y2Z0 365 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 BTAF1O14981 1849 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 SPOPO43791 374 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 SETQ01105 290 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-221ENST00000640341 ADCY1Q08828 1119 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 OTUD6AQ7L8S5 288 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 ARHGEF19Q8IW93 802 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 MKL1Q969V6 931 aa15.78■□□□□ 0.12
SCARB2-221ENST00000640341 JPH2Q9BR39 696 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-221ENST00000640341 POLR3CQ9BUI4 534 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms