RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 LIMCH1Q9UPQ0 1083 aa18.34■□□□□ 0.53
COLCA2-207ENST00000639470 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 POTEMA6NI47 508 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 PER2O15055 1255 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 TBX3O15119 743 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 FGF18O76093 207 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 SLITRK3O94933 977 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 YWHABP31946 246 aaKnown RBP18.33■□□□□ 0.52
COLCA2-207ENST00000639470 TXKP42681 527 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 NRIP1P48552 1158 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 NBR1Q14596 966 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 CALCRLQ16602 461 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 ODR4Q5SWX8 454 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 VN1R2Q8NFZ6 395 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 PRPF31Q8WWY3 499 aaKnown RBP18.33■□□□□ 0.52
COLCA2-207ENST00000639470 DHX33Q9H6R0 707 aaKnown RBP18.33■□□□□ 0.52
COLCA2-207ENST00000639470 IFT122Q9HBG6 1241 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 BRMS1Q9HCU9 246 aa18.33■□□□□ 0.52
COLCA2-207ENST00000639470 PIN4Q9Y237 131 aaKnown RBP18.33■□□□□ 0.52
COLCA2-207ENST00000639470 NT5C1B-RDH14C9J2C7 533 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 B4GALT3O60512 393 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 GLP2RO95838 553 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 SRGAP2CP0DJJ0 459 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 ZSCAN20P17040 1043 aaPredicted RBP18.32■□□□□ 0.52
COLCA2-207ENST00000639470 MCM7P33993 719 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 POLGP54098 1239 aaPredicted RBP18.32■□□□□ 0.52
COLCA2-207ENST00000639470 EMC2Q15006 297 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 XKR9Q5GH70 373 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 FAM178BQ8IXR5 827 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 C4orf19Q8IY42 314 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 THNSL1Q8IYQ7 743 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 MTMR9Q96QG7 549 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 TMEM117Q9H0C3 514 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 ELAC1Q9H777 363 aaKnown RBP18.32■□□□□ 0.52
COLCA2-207ENST00000639470 TTC12Q9H892 705 aaPredicted RBP18.32■□□□□ 0.52
COLCA2-207ENST00000639470 COL4A3BPQ9Y5P4 624 aa18.32■□□□□ 0.52
COLCA2-207ENST00000639470 FNDC1Q4ZHG4 1894 aaPredicted RBP18.32■□□□□ 0.52
COLCA2-207ENST00000639470 PLXNA4Q9HCM2 1894 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 A0A0U1RQF3 1178 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 FAM86C2PA6NEL3 165 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 NEMFO60524 1076 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 DNM2P50570 870 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 AFF1P51825 1210 aaKnown RBP18.31■□□□□ 0.52
COLCA2-207ENST00000639470 LAMTOR4Q0VGL1 99 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 TRIM29Q14134 588 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 ZNF174Q15697 407 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 PIGOQ8TEQ8 1089 aa18.31■□□□□ 0.52
COLCA2-207ENST00000639470 BARX2Q9UMQ3 279 aaPredicted RBP18.31■□□□□ 0.52
COLCA2-207ENST00000639470 CD2BP2O95400 341 aaKnown RBP18.3■□□□□ 0.52
COLCA2-207ENST00000639470 ADAM15Q13444 863 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 PLPP4Q5VZY2 271 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 TWF2Q6IBS0 349 aaKnown RBP18.3■□□□□ 0.52
COLCA2-207ENST00000639470 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 TMEM173Q86WV6 379 aaPredicted RBP18.3■□□□□ 0.52
COLCA2-207ENST00000639470 SLFN12Q8IYM2 578 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 ASAP3Q8TDY4 903 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 MICAL1Q8TDZ2 1067 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 C8orf76Q96K31 380 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 HSD17B14Q9BPX1 270 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 ZSWIM4Q9H7M6 989 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 CLEC1BQ9P126 229 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 PCDHA12Q9UN75 941 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 INPP5FQ9Y2H2 1132 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 PCDHB12Q9Y5F1 795 aa18.3■□□□□ 0.52
COLCA2-207ENST00000639470 HIDE1A8MVS5 230 aa18.29■□□□□ 0.52
COLCA2-207ENST00000639470 BAG4O95429 457 aaKnown RBP18.29■□□□□ 0.52
COLCA2-207ENST00000639470 PHKA2P46019 1235 aa18.29■□□□□ 0.52
COLCA2-207ENST00000639470 KCNT2Q6UVM3 1135 aa18.29■□□□□ 0.52
COLCA2-207ENST00000639470 ZNF410Q86VK4 478 aa18.29■□□□□ 0.52
COLCA2-207ENST00000639470 RNF149Q8NC42 400 aa18.29■□□□□ 0.52
COLCA2-207ENST00000639470 BCL7CQ8WUZ0 217 aaPredicted RBP18.29■□□□□ 0.52
COLCA2-207ENST00000639470 SLC7A3Q8WY07 619 aa18.29■□□□□ 0.52
COLCA2-207ENST00000639470 NAP1L4Q99733 375 aaKnown RBP18.29■□□□□ 0.52
COLCA2-207ENST00000639470 MBTPS2O43462 519 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 MED24O75448 989 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 SPATA31C1P0DKV0 1188 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 LAG3P18627 525 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 SFPQP23246 707 aaKnown RBP eCLIP18.28■□□□□ 0.52
COLCA2-207ENST00000639470 HOXA11P31270 313 aaPredicted RBP18.28■□□□□ 0.52
COLCA2-207ENST00000639470 NDUFV1P49821 464 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 NAALADL2Q58DX5 795 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 UBXN11Q5T124 520 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 MAEAQ7L5Y9 396 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 ABI1Q8IZP0 508 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 LRRC43Q8N309 656 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 PSPC1Q8WXF1 523 aaKnown RBP18.28■□□□□ 0.52
COLCA2-207ENST00000639470 C11orf16Q9NQ32 467 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 GPRC5CQ9NQ84 441 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 TLR9Q9NR96 1032 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 FAM105AQ9NUU6 356 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 CDH22Q9UJ99 828 aa18.28■□□□□ 0.52
COLCA2-207ENST00000639470 BDP1A6H8Y1 2624 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 FSCN2O14926 492 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 SSTR3P32745 418 aaPredicted RBP18.27■□□□□ 0.52
COLCA2-207ENST00000639470 RFC5P40937 340 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 CDR2LQ86X02 465 aaPredicted RBP18.27■□□□□ 0.52
COLCA2-207ENST00000639470 GJD3Q8N144 294 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 FEZF2Q8TBJ5 459 aa18.27■□□□□ 0.52
COLCA2-207ENST00000639470 AUTS2Q8WXX7 1259 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms