RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ATP9AO75110 1047 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 RGS20O76081 388 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 GNA14O95837 355 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 BCRP11274 1271 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 ALDH5A1P51649 535 aaPredicted RBP19.22■□□□□ 0.67
PCF11-207ENST00000624931 GNGT1P63211 74 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 ASTE1Q2TB18 679 aaPredicted RBP19.22■□□□□ 0.67
PCF11-207ENST00000624931 MMS22LQ6ZRQ5 1243 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 SMC1BQ8NDV3 1235 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 BCAS4Q8TDM0 211 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 FGD4Q96M96 766 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 TEKT3Q9BXF9 490 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 MMRN2Q9H8L6 949 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 GDF3Q9NR23 364 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 ABT1Q9ULW3 272 aaKnown RBP19.22■□□□□ 0.67
PCF11-207ENST00000624931 KIAA1024Q9UPX6 916 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 TLL2Q9Y6L7 1015 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 DOCK5Q9H7D0 1870 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 E9PMD0 336 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 DHX15O43143 795 aaKnown RBP19.21■□□□□ 0.67
PCF11-207ENST00000624931 SLC10A3P09131 477 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 SPATA31C1P0DKV0 1188 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 GTF2A1P52655 376 aaPredicted RBP19.21■□□□□ 0.67
PCF11-207ENST00000624931 SLC9C1Q4G0N8 1177 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 HYIQ5T013 277 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 CACNA2D4Q7Z3S7 1137 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 CATSPER3Q86XQ3 398 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 KIAA0895Q8NCT3 520 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 WHAMMQ8TF30 809 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 RAD54LQ92698 747 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 MMP19Q99542 508 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 EIF2AK1Q9BQI3 630 aaKnown RBP19.21■□□□□ 0.67
PCF11-207ENST00000624931 RGL1Q9NZL6 768 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 DMGDHQ9UI17 866 aaKnown RBP19.21■□□□□ 0.67
PCF11-207ENST00000624931 PLXNB2O15031 1838 aa19.21■□□□□ 0.67
PCF11-207ENST00000624931 KDM3AQ9Y4C1 1321 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 SLC26A4O43511 780 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 SORBS3O60504 671 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 ERLIN2O94905 339 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 SERPING1P05155 500 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 FCER1AP12319 257 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 CCT5P48643 541 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 PPP2R5CQ13362 524 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 RRAGAQ7L523 313 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 GSPT2Q8IYD1 628 aaKnown RBP19.2■□□□□ 0.66
PCF11-207ENST00000624931 FAM133AQ8N9E0 248 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 GPRC5AQ8NFJ5 357 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 BAP1Q92560 729 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 LARP4BQ92615 738 aaKnown RBP19.2■□□□□ 0.66
PCF11-207ENST00000624931 PARK7Q99497 189 aaKnown RBP19.2■□□□□ 0.66
PCF11-207ENST00000624931 BCAS3Q9H6U6 928 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 MLXIPQ9HAP2 919 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 CEP72Q9P209 647 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 GGA2Q9UJY4 613 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 FAM169AQ9Y6X4 670 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 FAM155AB1AL88 458 aaPredicted RBP19.2■□□□□ 0.66
PCF11-207ENST00000624931 ECM2O94769 699 aaPredicted RBP19.2■□□□□ 0.66
PCF11-207ENST00000624931 PSMC6P62333 389 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 GRM1Q13255 1194 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 CTTNQ14247 550 aaKnown RBP19.2■□□□□ 0.66
PCF11-207ENST00000624931 C10orf76Q5T2E6 689 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 CFAP58Q5T655 872 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 B3GNT9Q6UX72 402 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 KDM7AQ6ZMT4 941 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 GTF3C2Q8WUA4 911 aaPredicted RBP19.2■□□□□ 0.66
PCF11-207ENST00000624931 DYDC2Q96IM9 177 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 GDAP1L1Q96MZ0 367 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 INPP4AQ96PE3 977 aaPredicted RBP19.2■□□□□ 0.66
PCF11-207ENST00000624931 ZIC5Q96T25 663 aa19.2■□□□□ 0.66
PCF11-207ENST00000624931 LRRC53A6NM62 1247 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 COPB2P35606 906 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 XRRA1Q6P2D8 792 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 NFRKBQ6P4R8 1299 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 MICALL1Q8N3F8 863 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 ERMNQ8TAM6 284 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 CEP63Q96MT8 703 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 RIT2Q99578 217 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 TLR10Q9BXR5 811 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 MROH8Q9H579 483 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 FAM207AQ9NSI2 230 aaPredicted RBP19.19■□□□□ 0.66
PCF11-207ENST00000624931 TELO2Q9Y4R8 837 aa19.19■□□□□ 0.66
PCF11-207ENST00000624931 GRIN2DO15399 1336 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 ZNFX1Q9P2E3 1918 aaKnown RBP19.18■□□□□ 0.66
PCF11-207ENST00000624931 MYMKA6NI61 221 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 SSBP05455 408 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCF11-207ENST00000624931 PLEKP08567 350 aaPredicted RBP19.18■□□□□ 0.66
PCF11-207ENST00000624931 GUCY2CP25092 1073 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 KCTD2Q14681 263 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 SWT1Q5T5J6 900 aaKnown RBP19.18■□□□□ 0.66
PCF11-207ENST00000624931 KLHDC7AQ5VTJ3 777 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 SFMBT2Q5VUG0 894 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCF11-207ENST00000624931 SHCBP1Q8NEM2 672 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 DNERQ8NFT8 737 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 CEP89Q96ST8 783 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 WRAP73Q9P2S5 460 aaPredicted RBP19.18■□□□□ 0.66
PCF11-207ENST00000624931 MORF4L1Q9UBU8 362 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 CPA4Q9UI42 421 aa19.18■□□□□ 0.66
PCF11-207ENST00000624931 MANSC4A6NHS7 340 aaPredicted RBP19.17■□□□□ 0.66
PCF11-207ENST00000624931 BTNL10A8MVZ5 291 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms