RNA–Protein interactions for RNA: ENST00000624160.1

AC004009.3-201, humanhuman

BASIC

Gene AC004009.3, Length 645 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.3-201ENST00000624160 MAPK1P28482 360 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 BEX3Q00994 111 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 PTPN11Q06124 597 aaPredicted RBP9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 FOXD4L6Q3SYB3 417 aaPredicted RBP9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 UTP14CQ5TAP6 766 aaKnown RBP9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 TMEM214Q6NUQ4 689 aaKnown RBP9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 SWSAP1Q6NVH7 229 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 C16orf46Q6P387 395 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 FAM173BQ6P4H8 233 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 NFRKBQ6P4R8 1299 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 CXCL17Q6UXB2 119 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 ABHD15Q6UXT9 468 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 FOXD4L3Q6VB84 417 aaPredicted RBP9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 IGSF22Q8N9C0 903 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 LINC00301Q8NCQ3 95 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 JPH2Q9BR39 696 aaPredicted RBP9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 HTATIP2Q9BUP3 242 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 TMEM60Q9H2L4 133 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 C11orf49Q9H6J7 331 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 ZFAND3Q9H8U3 227 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 TUFT1Q9NNX1 390 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 FAM13BQ9NYF5 915 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 GABBR1Q9UBS5 961 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 VAV3Q9UKW4 847 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 PPME1Q9Y570 386 aa9.22□□□□□ -0.93
AC004009.3-201ENST00000624160 IGKV6D-21A0A0A0MT36 114 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 GSTTP1A0A1W2PQM5 241 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 SERTM1A2A2V5 107 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 RRN3P2A6NIE6 340 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 TLR3O15455 904 aaKnown RBP9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 CUTAO60888 179 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 UPP2O95045 317 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 ZNF286BP0CG31 522 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 XRCC6P12956 609 aaKnown RBP eCLIP9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 RPA1P27694 616 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 CCT6AP40227 531 aaKnown RBP9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 CHMP4BP1P59074 171 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 FOXK2Q01167 660 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 CENPCQ03188 943 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 KIAA0753Q2KHM9 967 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 XKR3Q5GH77 459 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 CCSAPQ6IQ19 270 aaPredicted RBP9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 B3GNT9Q6UX72 402 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 CAPN12Q6ZSI9 719 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 Q6ZVU0 165 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 C4orf19Q8IY42 314 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 C4orf32Q8N8J7 132 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 SNX29Q8TEQ0 813 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 NACC1Q96RE7 527 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 UIMC1Q96RL1 719 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 EIF2AK1Q9BQI3 630 aaKnown RBP9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 LXNQ9BS40 222 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 POLR3CQ9BUI4 534 aaPredicted RBP9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 SENP6Q9GZR1 1112 aaPredicted RBP9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 RCOR1Q9UKL0 485 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 ZDHHC9Q9Y397 364 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 NRCAMQ92823 1304 aa9.21□□□□□ -0.94
AC004009.3-201ENST00000624160 MYADML2A6NDP7 307 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 DCDC2CA8MYV0 355 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 CTAGE5O15320 804 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 HBP1O60381 514 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 MARCKSP29966 332 aaPredicted RBP9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 PRKCEQ02156 737 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 SPIRE1Q08AE8 756 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 MTMR3Q13615 1198 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 ITGA7Q13683 1181 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 PTPAQ15257 358 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 FAM47CQ5HY64 1035 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 TMEM63BQ5T3F8 832 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 C1orf53Q5VUE5 145 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 CCDC60Q8IWA6 550 aaPredicted RBP9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 TPH2Q8IWU9 490 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 CCDC155Q8N6L0 562 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 ATP8B4Q8TF62 1192 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 LEO1Q8WVC0 666 aaPredicted RBP9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 SLC7A3Q8WY07 619 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 GJA10Q969M2 543 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 PAWRQ96IZ0 340 aaKnown RBP9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 C16orf70Q9BSU1 422 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 C2orf49Q9BVC5 232 aaPredicted RBP9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 DNM3Q9UQ16 869 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 IGSF9BQ9UPX0 1349 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 COL1A2P08123 1366 aa9.2□□□□□ -0.94
AC004009.3-201ENST00000624160 FRMPD3Q5JV73 1810 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 C17orf102A2RUQ5 167 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 ARVCFO00192 962 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 MAGEB2O15479 319 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 GAS2O43903 313 aaKnown RBP9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 GDF9O60383 454 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 LYPLA2O95372 231 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 TIMP2P16035 220 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 EN2P19622 333 aaPredicted RBP9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 MARK3P27448 753 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 TMOD1P28289 359 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 YWHABP31946 246 aaKnown RBP9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 DNM2P50570 870 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 CYP4A11Q02928 519 aa9.19□□□□□ -0.94
AC004009.3-201ENST00000624160 PPFIA1Q13136 1202 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms