RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 HSD17B14Q9BPX1 270 aa20.05■□□□□ 0.8
CHMP2A-203ENST00000597209 EIF2AK1Q9BQI3 630 aaKnown RBP20.05■□□□□ 0.8
CHMP2A-203ENST00000597209 CWH43Q9H720 699 aa20.05■□□□□ 0.8
CHMP2A-203ENST00000597209 BRWD1Q9NSI6 2320 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 WNT7AO00755 349 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 LAG3P18627 525 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 FGFR4P22455 802 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 DNAJB1P25685 340 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 FOSBP53539 338 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 HYAL1Q12794 435 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 CTTNQ14247 550 aaKnown RBP20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 SPOUT1Q5T280 376 aaKnown RBP20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 COLGALT1Q8NBJ5 622 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 TCP11Q8WWU5 503 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 PPP2R3CQ969Q6 453 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 C8orf76Q96K31 380 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 FOXP1Q9H334 677 aaPredicted RBP20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 TTC12Q9H892 705 aaPredicted RBP20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 COL4A3BPQ9Y5P4 624 aa20.04■□□□□ 0.8
CHMP2A-203ENST00000597209 ASAP2O43150 1006 aa20.03■□□□□ 0.8
CHMP2A-203ENST00000597209 CSDE1O75534 798 aaKnown RBP20.03■□□□□ 0.8
CHMP2A-203ENST00000597209 ORC2Q13416 577 aaPredicted RBP20.03■□□□□ 0.8
CHMP2A-203ENST00000597209 TPH2Q8IWU9 490 aa20.03■□□□□ 0.8
CHMP2A-203ENST00000597209 PSPC1Q8WXF1 523 aaKnown RBP20.03■□□□□ 0.8
CHMP2A-203ENST00000597209 IFT122Q9HBG6 1241 aa20.03■□□□□ 0.8
CHMP2A-203ENST00000597209 ANKEF1Q9NU02 776 aa20.03■□□□□ 0.8
CHMP2A-203ENST00000597209 CLDND1Q9NY35 253 aa20.03■□□□□ 0.8
CHMP2A-203ENST00000597209 GRXCR2A6NFK2 248 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 SKIP12755 728 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 LTBRP36941 435 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 TXKP42681 527 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 PLCB3Q01970 1234 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 CYP4A11Q02928 519 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 XKR9Q5GH70 373 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 PTCRAQ6ISU1 281 aaPredicted RBP20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 LRRC55Q6ZSA7 311 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 SRGAP1Q7Z6B7 1085 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 KSR1Q8IVT5 923 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 ABI1Q8IZP0 508 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 LRRC43Q8N309 656 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 FBXO18Q8NFZ0 1043 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 PRPF31Q8WWY3 499 aaKnown RBP20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 NLRP4Q96MN2 994 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 LZTS1Q9Y250 596 aa20.02■□□□□ 0.8
CHMP2A-203ENST00000597209 NCOR1O75376 2440 aa20.02■□□□□ 0.79
CHMP2A-203ENST00000597209 PLXNA4Q9HCM2 1894 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 H3BQ06 376 aaPredicted RBP20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 ZBTB39O15060 712 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 ZNF623O75123 536 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 FGF18O76093 207 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 XRCC6P12956 609 aaKnown RBP eCLIP20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 ATF7P17544 494 aaPredicted RBP20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 IRS1P35568 1242 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 PHKA2P46019 1235 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 GUCY1B3Q02153 619 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 LAMTOR4Q0VGL1 99 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 ADAM15Q13444 863 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 EMC2Q15006 297 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 CLLU1OSQ5K130 101 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 PDE12Q6L8Q7 609 aaKnown RBP20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 CATSPER4Q7RTX7 472 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 FAM178BQ8IXR5 827 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 TMEM143Q96AN5 459 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 MTRQ99707 1265 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 TMEM60Q9H2L4 133 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 FAM50BQ9Y247 325 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 ARID2Q68CP9 1835 aa20.01■□□□□ 0.79
CHMP2A-203ENST00000597209 RAB27AP51159 221 aa20■□□□□ 0.79
CHMP2A-203ENST00000597209 RABEP1Q15276 862 aa20■□□□□ 0.79
CHMP2A-203ENST00000597209 TWF2Q6IBS0 349 aaKnown RBP20■□□□□ 0.79
CHMP2A-203ENST00000597209 FERMT3Q86UX7 667 aa20■□□□□ 0.79
CHMP2A-203ENST00000597209 THNSL1Q8IYQ7 743 aa20■□□□□ 0.79
CHMP2A-203ENST00000597209 FAM184AQ8NB25 1140 aa20■□□□□ 0.79
CHMP2A-203ENST00000597209 MRPL9Q9BYD2 267 aaKnown RBP20■□□□□ 0.79
CHMP2A-203ENST00000597209 TLR9Q9NR96 1032 aa20■□□□□ 0.79
CHMP2A-203ENST00000597209 HCSTQ9UBK5 93 aa20■□□□□ 0.79
CHMP2A-203ENST00000597209 PIN4Q9Y237 131 aaKnown RBP20■□□□□ 0.79
CHMP2A-203ENST00000597209 MYO7AQ13402 2215 aa20■□□□□ 0.79
CHMP2A-203ENST00000597209 BDP1A6H8Y1 2624 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 FSCN2O14926 492 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 DGAT1O75907 488 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 IL9P15248 144 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 MCM7P33993 719 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 PPM1AP35813 382 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 TRAPPC10P48553 1259 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 POU5F1BQ06416 359 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 MXD4Q14582 209 aaPredicted RBP19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 PCBP1Q15365 356 aaKnown RBP eCLIP19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 KCNT2Q6UVM3 1135 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 EP400NLQ6ZTU2 488 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 EFHBQ8N7U6 833 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 RNF169Q8NCN4 708 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 MRPS27Q92552 414 aaKnown RBP19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 ZNF558Q96NG5 402 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 XPNPEP1Q9NQW7 623 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 AGPAT5Q9NUQ2 364 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 FAM105AQ9NUU6 356 aa19.99■□□□□ 0.79
CHMP2A-203ENST00000597209 MUC3AQ02505 3323 aa19.98■□□□□ 0.79
CHMP2A-203ENST00000597209 FSD2A1L4K1 749 aa19.98■□□□□ 0.79
CHMP2A-203ENST00000597209 CARNS1A5YM72 827 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms