RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 RNF149Q8NC42 400 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 IFT122Q9HBG6 1241 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 DDX19AQ9NUU7 478 aaKnown RBP18.25■□□□□ 0.51
DNMT1-221ENST00000589538 RWDD3Q9Y3V2 267 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 ADGRA3Q8IWK6 1321 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 HOXA2O43364 376 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 SKIP12755 728 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 CYP11B2P19099 503 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 ARL2P36404 184 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 FAM189BP81408 668 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 HYIQ5T013 277 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 PADI6Q6TGC4 694 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 CATSPER4Q7RTX7 472 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 CMTR2Q8IYT2 770 aaKnown RBP18.24■□□□□ 0.51
DNMT1-221ENST00000589538 ARNTL2Q8WYA1 636 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 ZNF689Q96CS4 500 aaPredicted RBP18.24■□□□□ 0.51
DNMT1-221ENST00000589538 NFKBIZQ9BYH8 718 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 RC3H2Q9HBD1 1191 aaKnown RBP18.24■□□□□ 0.51
DNMT1-221ENST00000589538 TMEM161AQ9NX61 479 aa18.24■□□□□ 0.51
DNMT1-221ENST00000589538 MYO9BQ13459 2157 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 RALGAPA2Q2PPJ7 1873 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 A0A087WWV3 80 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 ARHGEF15O94989 841 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 EYA4O95677 639 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 LONP1P36776 959 aaKnown RBP18.23■□□□□ 0.51
DNMT1-221ENST00000589538 PTENP60484 403 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 NCBP1Q09161 790 aaKnown RBP18.23■□□□□ 0.51
DNMT1-221ENST00000589538 BTG3Q14201 252 aaPredicted RBP18.23■□□□□ 0.51
DNMT1-221ENST00000589538 IFNLR1Q8IU57 520 aaPredicted RBP18.23■□□□□ 0.51
DNMT1-221ENST00000589538 RSPH1Q8WYR4 309 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 CDK5RAP3Q96JB5 506 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 MMTAG2Q9BU76 263 aaKnown RBP18.23■□□□□ 0.51
DNMT1-221ENST00000589538 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 POLR3FQ9H1D9 316 aaPredicted RBP18.23■□□□□ 0.51
DNMT1-221ENST00000589538 BHMT2Q9H2M3 363 aa18.23■□□□□ 0.51
DNMT1-221ENST00000589538 A0A0U1RQF3 1178 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 PP2D1A8MPX8 630 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 GTPBP6O43824 516 aaPredicted RBP18.22■□□□□ 0.51
DNMT1-221ENST00000589538 EOMESO95936 686 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 FGFR4P22455 802 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 AXLP30530 894 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 UBA7P41226 1012 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 ECM1Q16610 540 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 FAM102BQ5T8I3 360 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 KIFAP3Q92845 792 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 TIPINQ9BVW5 301 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 CERS4Q9HA82 394 aa18.22■□□□□ 0.51
DNMT1-221ENST00000589538 PIN4Q9Y237 131 aaKnown RBP18.22■□□□□ 0.51
DNMT1-221ENST00000589538 MORC2Q9Y6X9 1032 aaPredicted RBP18.22■□□□□ 0.51
DNMT1-221ENST00000589538 RBAK-RBAKDNI3L0D1 243 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 CSDE1O75534 798 aaKnown RBP18.21■□□□□ 0.51
DNMT1-221ENST00000589538 ERLIN2O94905 339 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 POU3F3P20264 500 aaPredicted RBP18.21■□□□□ 0.51
DNMT1-221ENST00000589538 IGFBP4P22692 258 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 GLRA2P23416 452 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 CDC25AP30304 524 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 RAB27AP51159 221 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 CAPSQ13938 189 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 PPP2R5AQ15172 486 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 TWF2Q6IBS0 349 aaKnown RBP18.21■□□□□ 0.51
DNMT1-221ENST00000589538 CABP7Q86V35 215 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 ECHDC2Q86YB7 292 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 FBXO22Q8NEZ5 403 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 MAFAQ8NHW3 353 aaPredicted RBP18.21■□□□□ 0.51
DNMT1-221ENST00000589538 ASAP3Q8TDY4 903 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 CLP1Q92989 425 aaKnown RBP18.21■□□□□ 0.51
DNMT1-221ENST00000589538 CALML4Q96GE6 196 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 C2orf40Q9H1Z8 148 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 AGPAT5Q9NUQ2 364 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 LMCD1Q9NZU5 365 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 DAXXQ9UER7 740 aaPredicted RBP18.21■□□□□ 0.51
DNMT1-221ENST00000589538 CLIC4Q9Y696 253 aa18.21■□□□□ 0.51
DNMT1-221ENST00000589538 NLRC5Q86WI3 1866 aa18.2■□□□□ 0.5
DNMT1-221ENST00000589538 RB1P06400 928 aa18.2■□□□□ 0.5
DNMT1-221ENST00000589538 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
DNMT1-221ENST00000589538 ZRSR1Q15695 479 aaKnown RBP18.2■□□□□ 0.5
DNMT1-221ENST00000589538 ZBTB8OSQ8IWT0 167 aa18.2■□□□□ 0.5
DNMT1-221ENST00000589538 TMEM192Q8IY95 271 aa18.2■□□□□ 0.5
DNMT1-221ENST00000589538 CCDC51Q96ER9 411 aa18.2■□□□□ 0.5
DNMT1-221ENST00000589538 IFT74Q96LB3 600 aa18.2■□□□□ 0.5
DNMT1-221ENST00000589538 ZNF396Q96N95 335 aaPredicted RBP18.2■□□□□ 0.5
DNMT1-221ENST00000589538 LRRIQ4A6NIV6 560 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 E9PMD0 336 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 INO80B-WBP1J3KQ70 363 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 PTPAQ15257 358 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 EPC2Q52LR7 807 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 MAEAQ7L5Y9 396 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 ABI1Q8IZP0 508 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 C17orf80Q9BSJ5 609 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 PLVAPQ9BX97 442 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 MINDY3Q9H8M7 445 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 KCND2Q9NZV8 630 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 SRPRBQ9Y5M8 271 aaKnown RBP18.19■□□□□ 0.5
DNMT1-221ENST00000589538 CHD7Q9P2D1 2997 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 MYH15Q9Y2K3 1946 aa18.19■□□□□ 0.5
DNMT1-221ENST00000589538 FNDC1Q4ZHG4 1894 aaPredicted RBP18.18■□□□□ 0.5
DNMT1-221ENST00000589538 C5orf67F2Z3F1 127 aa18.18■□□□□ 0.5
DNMT1-221ENST00000589538 ZNF623O75123 536 aa18.18■□□□□ 0.5
DNMT1-221ENST00000589538 ZSCAN22P10073 491 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms