RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 KCNN1Q92952 543 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 ATP6V0A4Q9HBG4 840 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 XPNPEP1Q9NQW7 623 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 SAGE1Q9NXZ1 904 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 CEP72Q9P209 647 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 KCNG1Q9UIX4 513 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 DMP1Q13316 513 aaPredicted RBP31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 FAM186BQ8IYM0 893 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 TMEM161BQ8NDZ6 487 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 SEPT1Q8WYJ6 367 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 PCYT2Q99447 389 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 CFHR5Q9BXR6 569 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 WBP1LQ9NX94 342 aa31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 EPN1Q9Y6I3 576 aaPredicted RBP31.15■■■□□ 2.58
CTDNEP1-210ENST00000574322 GTPBP10A4D1E9 387 aaKnown RBP31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 STRNO43815 780 aa31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 NOL4O94818 638 aa31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 GGPS1O95749 300 aa31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 NPTX2P47972 431 aa31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 CCDC62Q6P9F0 684 aa31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 CCDC170Q8IYT3 715 aa31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 MYRIPQ8NFW9 859 aa31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 NUCKS1Q9H1E3 243 aaKnown RBP31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 FRMD4BQ9Y2L6 1034 aa31.14■■■□□ 2.58
CTDNEP1-210ENST00000574322 SORBS3O60504 671 aa31.13■■■□□ 2.57
CTDNEP1-210ENST00000574322 PPP2R5AQ15172 486 aa31.13■■■□□ 2.57
CTDNEP1-210ENST00000574322 C17orf99Q6UX52 265 aa31.13■■■□□ 2.57
CTDNEP1-210ENST00000574322 TRMT1LQ7Z2T5 733 aaKnown RBP31.13■■■□□ 2.57
CTDNEP1-210ENST00000574322 CEP89Q96ST8 783 aa31.13■■■□□ 2.57
CTDNEP1-210ENST00000574322 PLCB1Q9NQ66 1216 aa31.13■■■□□ 2.57
CTDNEP1-210ENST00000574322 PPME1Q9Y570 386 aa31.13■■■□□ 2.57
CTDNEP1-210ENST00000574322 SLC16A4O15374 487 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 NDUFA10O95299 355 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 ABCD1P33897 745 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 MCCD1P59942 119 aaPredicted RBP31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 ZNF792Q3KQV3 632 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 CELF3Q5SZQ8 465 aaKnown RBP31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 WDR78Q5VTH9 848 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 FAM160B1Q5W0V3 765 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 SYN2Q92777 582 aaPredicted RBP31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 DHX33Q9H6R0 707 aaKnown RBP31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 EXOC7Q9UPT5 735 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 MAPK13O15264 365 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 ARIH2O95376 493 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 SCP2P22307 547 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 LY6KQ17RY6 165 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 FAM110CQ1W6H9 321 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 DPY19L2P1Q6NXN4 242 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 PHLPP2Q6ZVD8 1323 aa31.12■■■□□ 2.57
CTDNEP1-210ENST00000574322 PLXNB2O15031 1838 aa31.11■■■□□ 2.57
CTDNEP1-210ENST00000574322 PDXDC1Q6P996 788 aa31.11■■■□□ 2.57
CTDNEP1-210ENST00000574322 EEPD1Q7L9B9 569 aa31.11■■■□□ 2.57
CTDNEP1-210ENST00000574322 ZNF467Q7Z7K2 595 aaPredicted RBP31.11■■■□□ 2.57
CTDNEP1-210ENST00000574322 MAP4K3Q8IVH8 894 aa31.11■■■□□ 2.57
CTDNEP1-210ENST00000574322 BSNDQ8WZ55 320 aa31.11■■■□□ 2.57
CTDNEP1-210ENST00000574322 MLXIPQ9HAP2 919 aa31.11■■■□□ 2.57
CTDNEP1-210ENST00000574322 TBX20Q9UMR3 447 aa31.11■■■□□ 2.57
CTDNEP1-210ENST00000574322 LGR5O75473 907 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 STAT5BP51692 787 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 TARBP2Q15633 366 aaKnown RBP31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 LSM14BQ9BX40 385 aaKnown RBP31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 KMT5AQ9NQR1 393 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 NRBP2Q9NSY0 501 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 PLXNA1Q9UIW2 1896 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 H0YCG3 227 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 GTF2F1P35269 517 aaKnown RBP eCLIP31.1■■■□□ 2.577e-25■■□□□ 11.7
CTDNEP1-210ENST00000574322 MTERF2Q49AM1 385 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 GANQ9H2C0 597 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 FBXL5Q9UKA1 691 aa31.1■■■□□ 2.57
CTDNEP1-210ENST00000574322 TCF7P36402 384 aaPredicted RBP31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 RFC5P40937 340 aa31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 CYP2J2P51589 502 aa31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 EMC2Q15006 297 aa31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 SYT10Q6XYQ8 523 aa31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 ZNF592Q92610 1267 aa31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 GPR20Q99678 358 aa31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 NHEJ1Q9H9Q4 299 aaPredicted RBP31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 DIS3Q9Y2L1 958 aaKnown RBP31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 MCM3APO60318 1980 aa31.09■■■□□ 2.57
CTDNEP1-210ENST00000574322 CCDC169A6NNP5 214 aa31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 EXOC3O60645 756 aa31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 CYLC1P35663 651 aaPredicted RBP31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 DCAF17Q5H9S7 520 aaPredicted RBP31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 ZNF662Q6ZS27 426 aa31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 RRAGAQ7L523 313 aa31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 CACNA2D4Q7Z3S7 1137 aa31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 ACRBPQ8NEB7 543 aa31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 FAM167AQ96KS9 214 aa31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 CRACR2AQ9BSW2 395 aa31.08■■■□□ 2.57
CTDNEP1-210ENST00000574322 LRRC53A6NM62 1247 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 EIF3CLB5ME19 914 aaKnown RBP31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 ADORA2AP29274 412 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 EXOC3L4Q17RC7 722 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 GBP6Q6ZN66 633 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 ARMCX2Q7L311 632 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 FBXO16Q8IX29 292 aaPredicted RBP31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 SCFD2Q8WU76 684 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 IFT74Q96LB3 600 aa31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 EIF3CQ99613 913 aaKnown RBP31.07■■■□□ 2.56
CTDNEP1-210ENST00000574322 ARHGAP28Q9P2N2 729 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms