RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 COL20A1Q9P218 1284 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 NDRG2Q9UN36 371 aaKnown RBP10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 ZFP37Q9Y6Q3 630 aaPredicted RBP10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 SPAARA0A1B0GVQ0 90 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 GPAA1O43292 621 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 ATP5JP18859 108 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 IER5Q5VY09 327 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 BTNL9Q6UXG8 535 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 SLC24A5Q71RS6 500 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 ITPRIPQ8IWB1 547 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 SMG7Q92540 1137 aaKnown RBP10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 RMDN3Q96TC7 470 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 MLXIPQ9HAP2 919 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 LMAN1LQ9HAT1 526 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 TMEM9BQ9NQ34 198 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 C1orf112Q9NSG2 853 aa10.86□□□□□ -0.67
PPP1R3E-204ENST00000559942 DOCK5Q9H7D0 1870 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 NT5C1B-RDH14C9J2C7 533 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 M0R2C6 588 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 INPPL1O15357 1258 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 NFX1Q12986 1120 aaKnown RBP10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 UAP1L1Q3KQV9 507 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 ARHGEF16Q5VV41 709 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 KCNV1Q6PIU1 500 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 KBTBD6Q86V97 674 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 IFNL3Q8IZI9 196 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 LRRC43Q8N309 656 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 FAM181AQ8N9Y4 354 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 SYTL5Q8TDW5 730 aaPredicted RBP10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 PHKBQ93100 1093 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 KIF1BPQ96EK5 621 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 ADAM2Q99965 735 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 PIDD1Q9HB75 910 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 RGS18Q9NS28 235 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 PNMA2Q9UL42 364 aa10.85□□□□□ -0.67
PPP1R3E-204ENST00000559942 NUP205Q92621 2012 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 GOLGA4Q13439 2230 aaKnown RBP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 LNP1A1A4G5 178 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 DENND3A2RUS2 1198 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 ZNF316A6NFI3 1004 aaPredicted RBP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 C9IYK1 514 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 K7ESF4 209 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 M0QZ92 97 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 MGEA5O60502 916 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 SLC3A2P08195 630 aaKnown RBP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 MYCLP12524 364 aaPredicted RBP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 ALDH7A1P49419 539 aaKnown RBP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 METAP2P50579 478 aaKnown RBP eCLIP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 POLGP54098 1239 aaPredicted RBP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 CTDSPL2Q05D32 466 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 PPARAQ07869 468 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 MTSS1LQ765P7 747 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 WDR5BQ86VZ2 330 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 SPEM1Q8N4L4 309 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 CASD1Q96PB1 797 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 EMILIN2Q9BXX0 1053 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 CPVLQ9H3G5 476 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 MAN1C1Q9NR34 630 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 HEBP1Q9NRV9 189 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 TCP11L1Q9NUJ3 509 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 TMEM161AQ9NX61 479 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 ZNF215Q9UL58 517 aaPredicted RBP10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 MYH6P13533 1939 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
PPP1R3E-204ENST00000559942 AHCTF1Q8WYP5 2266 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 A0A087WV48 116 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 PATL2C9JE40 543 aaKnown RBP10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 NOP56O00567 594 aaKnown RBP10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 MAN2B1O00754 1011 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 NR3C2P08235 984 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 ABCG1P45844 678 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 SP2Q02086 613 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 TMEM266Q2M3C6 531 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 ZKSCAN2Q63HK3 967 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 ELMSAN1Q6PJG2 1045 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 FAM43BQ6ZT52 329 aaPredicted RBP10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 RAB44Q7Z6P3 723 aaPredicted RBP10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 TRIM50Q86XT4 487 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 RGS22Q8NE09 1264 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 GAB3Q8WWW8 586 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 APPBP2Q92624 585 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 NAPBQ9H115 298 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 ADAMTS10Q9H324 1103 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 TRPV2Q9Y5S1 764 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 MTCL1Q9Y4B5 1905 aaKnown RBP10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 CCDC171Q6TFL3 1326 aa10.83□□□□□ -0.68
PPP1R3E-204ENST00000559942 CDX4O14627 284 aaPredicted RBP10.82□□□□□ -0.68
PPP1R3E-204ENST00000559942 HOXA2O43364 376 aa10.82□□□□□ -0.68
PPP1R3E-204ENST00000559942 RFPL2O75678 378 aa10.82□□□□□ -0.68
PPP1R3E-204ENST00000559942 RPP40O75818 363 aaKnown RBP10.82□□□□□ -0.68
PPP1R3E-204ENST00000559942 PAPSS2O95340 614 aaPredicted RBP10.82□□□□□ -0.68
PPP1R3E-204ENST00000559942 RPLP2P05387 115 aaKnown RBP10.82□□□□□ -0.68
PPP1R3E-204ENST00000559942 GNAT2P19087 354 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms