RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SPDYE3A6NKU9 549 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 hCG_1984214I3L0E3 225 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 NOP56O00567 594 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 EIF5BO60841 1220 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 NNTQ13423 1086 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 LIAT1Q6ZQX7 453 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 RAB11FIP4Q86YS3 637 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 ZNF713Q8N859 430 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 PHOSPHO2Q8TCD6 241 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 PPP1R13LQ8WUF5 828 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 HSH2DQ96JZ2 352 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 TCEANC2Q96MN5 208 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 CTAGE1Q96RT6 745 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 SRPK1Q96SB4 655 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 ALG1Q9BT22 464 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 KRTAP3-3Q9BYR6 98 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 KRTAP3-2Q9BYR7 98 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 GLT8D2Q9H1C3 349 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 CHRDQ9H2X0 955 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 ZNF576Q9H609 170 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 METTL14Q9HCE5 456 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-228ENST00000557033 KLF18A0A0U1RQI7 1052 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 hCG_1642624A0A1W2PR95 340 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 GRXCR1A8MXD5 290 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 EREGO14944 169 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 FOSP01100 380 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 ZNF286BP0CG31 522 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 SELPP16109 830 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 PSMA5P28066 241 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 EIF4A3P38919 411 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 RELBQ01201 579 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 BLOC1S2Q6QNY1 142 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 HEATR3Q7Z4Q2 680 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 DEFB128Q7Z7B8 93 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 C3orf58Q8NDZ4 430 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 GPR20Q99678 358 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 FTOQ9C0B1 505 aaKnown RBP eCLIP11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 ZNF395Q9H8N7 513 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 PPP4R2Q9NY27 417 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 STRIP2Q9ULQ0 834 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 PCDHA6Q9UN73 950 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 PCDHA8Q9Y5H6 950 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
HNRNPC-228ENST00000557033 CNTNAP5Q8WYK1 1306 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 GOLGA8AA7E2F4 631 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 GOLGA8BA8MQT2 603 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 BAIAP3O94812 1187 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 LGALS2P05162 132 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 GNAT1P11488 350 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 CKBP12277 381 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 ITGB5P18084 799 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 GPC1P35052 558 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 SOX9P48436 509 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 NAPAP54920 295 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 ANAPC15P60006 121 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 RAB33AQ14088 237 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 GRIN2CQ14957 1233 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 ERICH6BQ5W0A0 696 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 WWC2Q6AWC2 1192 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 Q6ZUG5 572 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 LRRC8DQ7L1W4 858 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 C1orf127Q8N9H9 656 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 GLIS3Q8NEA6 775 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 MYLIPQ8WY64 445 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 JAKMIP1Q96N16 626 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 TMEM74Q96NL1 305 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 KLF16Q9BXK1 252 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 AGXT2Q9BYV1 514 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 BCAS3Q9H6U6 928 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 SLC28A3Q9HAS3 691 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 RIC8AQ9NPQ8 531 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 JADE2Q9NQC1 790 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 BARHL2Q9NY43 387 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 CNTN3Q9P232 1028 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 PCDHA11Q9Y5I1 949 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 UBIAD1Q9Y5Z9 338 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 COL6A3P12111 3177 aa11.2□□□□□ -0.62
HNRNPC-228ENST00000557033 TRIP12Q14669 1992 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 C17orf102A2RUQ5 167 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 CXCL10P02778 98 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 FOSL2P15408 326 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 KCNA2P16389 499 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 ATP2A2P16615 1042 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 RPS6KB1P23443 525 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 CDC27P30260 824 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 HOXC8P31273 242 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 METAP2P50579 478 aaKnown RBP eCLIP11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 MTMR1Q13613 665 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 GPNMBQ14956 572 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 UBE2SQ16763 222 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 TRIM71Q2Q1W2 868 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 KIAA0319Q5VV43 1072 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 MCTP2Q6DN12 878 aa11.19□□□□□ -0.62
HNRNPC-228ENST00000557033 BTLAQ7Z6A9 289 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms