RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 Q4G0T1 1027 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 ODR4Q5SWX8 454 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 PLA2G4FQ68DD2 849 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 MCTP2Q6DN12 878 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 ANO5Q75V66 913 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 RUFY3Q7L099 469 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 MIER3Q7Z3K6 550 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 C12orf76Q8N812 135 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 CCDC148Q8NFR7 591 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 NLRP7Q8WX94 980 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 ZNF558Q96NG5 402 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 VN1R3Q9BXE9 311 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 NIFKQ9BYG3 293 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 SMOC2Q9H3U7 446 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 ENTPD7Q9NQZ7 604 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 SH3GLB2Q9NR46 395 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 SPG21Q9NZD8 308 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 SEPT9Q9UHD8 586 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 LZTS1Q9Y250 596 aa11.36□□□□□ -0.59
HNRNPC-218ENST00000555215 C2orf71A6NGG8 1288 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 CLASP2O75122 1294 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 TMOD1P28289 359 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 JAK3P52333 1124 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 NPEPPSP55786 919 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 BCAR1P56945 870 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 INF2Q27J81 1249 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 XKR3Q5GH77 459 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 EARS2Q5JPH6 523 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 TMC7Q7Z402 723 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 BMP8AQ7Z5Y6 402 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 BLIDQ8IZY5 108 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 LRRC43Q8N309 656 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 MRPL43Q8N983 215 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 BICD2Q8TD16 824 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 OXER1Q8TDS5 423 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 PBXIP1Q96AQ6 731 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 ASIC4Q96FT7 647 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 TCEAL9Q9UHQ7 104 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 HCFC2Q9Y5Z7 792 aa11.35□□□□□ -0.59
HNRNPC-218ENST00000555215 PTPRZ1P23471 2315 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 FAM205CA6NFA0 338 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 DDX11L8A8MPP1 907 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 ZBTB39O15060 712 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 MAFO75444 373 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 PSMA5P28066 241 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 SFNP31947 248 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 PHKA2P46019 1235 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 SSRP1Q08945 709 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 TCF15Q12870 199 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 PDE12Q6L8Q7 609 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 FAM43BQ6ZT52 329 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 RHPN2Q8IUC4 686 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 MFSD14AQ96MC6 490 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 SCLT1Q96NL6 688 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 CDCA3Q99618 268 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 POMKQ9H5K3 350 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 NRDE2Q9H7Z3 1164 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 MINDY3Q9H8M7 445 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 IFT122Q9HBG6 1241 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 NGRNQ9NPE2 291 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 SUCLA2Q9P2R7 463 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 DNAJB4Q9UDY4 337 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 PUF60Q9UHX1 559 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 VAV3Q9UKW4 847 aa11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 ZFHX2Q9C0A1 2572 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-218ENST00000555215 C2CD4DB7Z1M9 353 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 HOXA2O43364 376 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 DEXIO95424 95 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 CXCL14O95715 111 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 EOMESO95936 686 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 GALTP07902 379 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 EPCAMP16422 314 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 ZNF280BQ86YH2 543 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 DAGLBQ8NCG7 672 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 HAS1Q92839 578 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 ZNF274Q96GC6 653 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 GCOM2Q9BZD3 368 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 BMP2KQ9NSY1 1161 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 TBC1D13Q9NVG8 400 aa11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-218ENST00000555215 ZC3H11AO75152 810 aaKnown RBP eCLIP11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 OFD1O75665 1012 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 DDHD2O94830 711 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 CTDNEP1O95476 244 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 HOXA11P31270 313 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 SLC11A1P49279 550 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 KRT17Q04695 432 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 SIGLEC14Q08ET2 396 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 SCRN1Q12765 414 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 PTPN21Q16825 1174 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 LETM2Q2VYF4 491 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 UBXN11Q5T124 520 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 TWF2Q6IBS0 349 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 AGMOQ6ZNB7 445 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 VPS52Q8N1B4 723 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 FBXL6Q8N531 539 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 RDM1Q8NG50 284 aa11.32□□□□□ -0.6
HNRNPC-218ENST00000555215 SLC22A17Q8WUG5 538 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms