RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 FAM228BP0C875 321 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 NR2F2P24468 414 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 CASP4P49662 377 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 RPS6P62753 249 aaKnown RBP16.33■□□□□ 0.2
CHFR-223ENST00000544268 GIT2Q14161 759 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 PPP2R5AQ15172 486 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 GADL1Q6ZQY3 521 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 CCDC65Q8IXS2 484 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 SYTL5Q8TDW5 730 aaPredicted RBP16.33■□□□□ 0.2
CHFR-223ENST00000544268 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHFR-223ENST00000544268 TLR10Q9BXR5 811 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 EHMT1Q9H9B1 1298 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 BMP2KQ9NSY1 1161 aaPredicted RBP16.33■□□□□ 0.2
CHFR-223ENST00000544268 RNF146Q9NTX7 359 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 HOXC10Q9NYD6 342 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 ADAMTS1Q9UHI8 967 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 AJAP1Q9UKB5 411 aaPredicted RBP16.33■□□□□ 0.2
CHFR-223ENST00000544268 A0A0G2JLL6 359 aaPredicted RBP16.33■□□□□ 0.2
CHFR-223ENST00000544268 KLHL33A6NCF5 533 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 GOLGA6BA6NDN3 693 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 TBX3O15119 743 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 CLIC2O15247 247 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 MEFVO15553 781 aaPredicted RBP16.33■□□□□ 0.2
CHFR-223ENST00000544268 CHMP2AO43633 222 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 USO1O60763 962 aaKnown RBP16.33■□□□□ 0.2
CHFR-223ENST00000544268 TACC1O75410 805 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 KLHDC7AQ5VTJ3 777 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 GJB7Q6PEY0 223 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 ARMC9Q7Z3E5 817 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 PRRT2Q7Z6L0 340 aaPredicted RBP16.33■□□□□ 0.2
CHFR-223ENST00000544268 TRIM58Q8NG06 486 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 NT5C3AQ9H0P0 336 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 ZNF408Q9H9D4 720 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 PNMA2Q9UL42 364 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 ZSCAN5CA6NGD5 496 aaPredicted RBP16.32■□□□□ 0.2
CHFR-223ENST00000544268 FGFR1OPO95684 399 aaKnown RBP16.32■□□□□ 0.2
CHFR-223ENST00000544268 KLRC1P26715 233 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 OAZ1P54368 228 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 KCNH2Q12809 1159 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 CTTNQ14247 550 aaKnown RBP16.32■□□□□ 0.2
CHFR-223ENST00000544268 WLSQ5T9L3 541 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 NSMFQ6X4W1 530 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 IL31RAQ8NI17 732 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 FAM20AQ96MK3 541 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 CD248Q9HCU0 757 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 RPTORQ8N122 1335 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 KDM3AQ9Y4C1 1321 aa16.32■□□□□ 0.2
CHFR-223ENST00000544268 ANO9A1A5B4 782 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 SFMBT2Q5VUG0 894 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 CCNI2Q6ZMN8 369 aaPredicted RBP16.31■□□□□ 0.2
CHFR-223ENST00000544268 SPATA4Q8NEY3 305 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 N4BP2L2Q92802 583 aaPredicted RBP16.31■□□□□ 0.2
CHFR-223ENST00000544268 OPTNQ96CV9 577 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 RPGRIP1Q96KN7 1286 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 SELENOOQ9BVL4 669 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 SAMM50Q9Y512 469 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 PCNTO95613 3336 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 RBBP6Q7Z6E9 1792 aaKnown RBP16.31■□□□□ 0.2
CHFR-223ENST00000544268 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 GOLGA8KD6RF30 607 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 PEX10O60683 326 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 PLS1Q14651 629 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 RNF207Q6ZRF8 634 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 YTHDF3Q7Z739 585 aaKnown RBP16.31■□□□□ 0.2
CHFR-223ENST00000544268 ITFG2Q969R8 447 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 TAAR1Q96RJ0 339 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 TSGA10Q9BZW7 698 aa16.31■□□□□ 0.2
CHFR-223ENST00000544268 RBM12Q9NTZ6 932 aaKnown RBP16.31■□□□□ 0.2
CHFR-223ENST00000544268 ATP2A1O14983 1001 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 PALMO75781 387 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 AKAP3O75969 853 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 PPIL2Q13356 520 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 DCAF17Q5H9S7 520 aaPredicted RBP16.3■□□□□ 0.2
CHFR-223ENST00000544268 LDLRAD1Q5T700 205 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 PROCA1Q8NCQ7 364 aaPredicted RBP16.3■□□□□ 0.2
CHFR-223ENST00000544268 CEP72Q9P209 647 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 ODF2LQ9ULJ1 636 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 KCNH4Q9UQ05 1017 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 LOC285556D6RIA3 1793 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 FRMD3A2A2Y4 597 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 CXCL11O14625 94 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 SKOR1P84550 965 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 CKAP4Q07065 602 aaKnown RBP16.3■□□□□ 0.2
CHFR-223ENST00000544268 BAATQ14032 418 aaPredicted RBP16.3■□□□□ 0.2
CHFR-223ENST00000544268 MICALCLQ6ZW33 695 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 GANQ9H2C0 597 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 MAP3K20Q9NYL2 800 aaKnown RBP16.3■□□□□ 0.2
CHFR-223ENST00000544268 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
CHFR-223ENST00000544268 ESYT3A0FGR9 886 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 NDUFAB1O14561 156 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 ITGB5P18084 799 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 EIF2AK2P19525 551 aaKnown RBP16.29■□□□□ 0.2
CHFR-223ENST00000544268 SMTNP53814 917 aa16.29■□□□□ 0.2
CHFR-223ENST00000544268 CRYMQ14894 314 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms