RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 NANOS3P60323 173 aaKnown RBP7.8□□□□□ -1.16
CCDC7-209ENST00000539197 TTC38Q5R3I4 469 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 SOGA3Q5TF21 947 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 CLEC14AQ86T13 490 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 ELOA2Q8IYF1 753 aaPredicted RBP7.8□□□□□ -1.16
CCDC7-209ENST00000539197 PLA2G15Q8NCC3 412 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 DYDC2Q96IM9 177 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 WDR92Q96MX6 357 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 PCIF1Q9H4Z3 704 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 IL23AQ9NPF7 189 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 RCAN3Q9UKA8 241 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 DMRT1Q9Y5R6 373 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 CYP17A1P05093 508 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 SDSP20132 328 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 IGFALSP35858 605 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 SMAD3P84022 425 aaKnown RBP7.79□□□□□ -1.16
CCDC7-209ENST00000539197 SQSTM1Q13501 440 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 TOB2Q14106 344 aaPredicted RBP7.79□□□□□ -1.16
CCDC7-209ENST00000539197 PIK3R6Q5UE93 754 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 KRT40Q6A162 431 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 ESRP1Q6NXG1 681 aaKnown RBP7.79□□□□□ -1.16
CCDC7-209ENST00000539197 ZNF575Q86XF7 245 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 DNAJC10Q8IXB1 793 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 ZG16BQ96DA0 208 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
CCDC7-209ENST00000539197 GPR87Q9BY21 358 aa7.79□□□□□ -1.16
CCDC7-209ENST00000539197 POLR3BQ9NW08 1133 aaPredicted RBP7.79□□□□□ -1.16
CCDC7-209ENST00000539197 OPA1O60313 960 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 PPFIA2O75334 1257 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 VSIG10L2P0DP72 767 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 RABGGTBP53611 331 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 FKBP15Q5T1M5 1219 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 C1QL3Q5VWW1 255 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 UNQ6494/PRO21346Q6UXR6 183 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 NME9Q86XW9 330 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 XDHP47989 1333 aa7.78□□□□□ -1.16
CCDC7-209ENST00000539197 TMEM191CA6NGB0 347 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 H7C1D1 291 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 PPP1R12AO14974 1030 aaPredicted RBP7.77□□□□□ -1.17
CCDC7-209ENST00000539197 DAPK3O43293 454 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 STC2O76061 302 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 PTGS2P35354 604 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 BCAR1P56945 870 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 ZNF174Q15697 407 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 CREB3L3Q68CJ9 461 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 MFSD5Q6N075 450 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 BMP8AQ7Z5Y6 402 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 RPUSD2Q8IZ73 545 aaKnown RBP7.77□□□□□ -1.17
CCDC7-209ENST00000539197 MB21D1Q8N884 522 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 RPGRQ92834 1020 aaKnown RBP7.77□□□□□ -1.17
CCDC7-209ENST00000539197 ELF4Q99607 663 aaPredicted RBP7.77□□□□□ -1.17
CCDC7-209ENST00000539197 TTPALQ9BTX7 342 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 KRTAP9-8Q9BYQ0 159 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 NRDE2Q9H7Z3 1164 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 CABP5Q9NP86 173 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 NCDNQ9UBB6 729 aa7.77□□□□□ -1.17
CCDC7-209ENST00000539197 KLRG2A4D1S0 409 aaPredicted RBP7.76□□□□□ -1.17
CCDC7-209ENST00000539197 ASLP04424 464 aa7.76□□□□□ -1.17
CCDC7-209ENST00000539197 JUNP05412 331 aaKnown RBP7.76□□□□□ -1.17
CCDC7-209ENST00000539197 RANGAP1P46060 587 aaPredicted RBP7.76□□□□□ -1.17
CCDC7-209ENST00000539197 ARL8AQ96BM9 186 aa7.76□□□□□ -1.17
CCDC7-209ENST00000539197 HAPLN2Q9GZV7 340 aa7.76□□□□□ -1.17
CCDC7-209ENST00000539197 H2AFY2Q9P0M6 372 aaPredicted RBP7.76□□□□□ -1.17
CCDC7-209ENST00000539197 SYNPO2Q9UMS6 1093 aa7.76□□□□□ -1.17
CCDC7-209ENST00000539197 FOXN1O15353 648 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 MFAP3LO75121 409 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 APOL3O95236 402 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 JMJD7P0C870 316 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 PTTG1IPP53801 180 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 FSTL1Q12841 308 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 EPHA7Q15375 998 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 ATXN2LQ8WWM7 1075 aaKnown RBP7.75□□□□□ -1.17
CCDC7-209ENST00000539197 HAS1Q92839 578 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 CRAMP1Q96RY5 1269 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 MYL10Q9BUA6 226 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 B4GALT6Q9UBX8 382 aa7.75□□□□□ -1.17
CCDC7-209ENST00000539197 CDK11AQ9UQ88 783 aaPredicted RBP7.75□□□□□ -1.17
CCDC7-209ENST00000539197 A0A0A6YYK5 440 aaPredicted RBP7.74□□□□□ -1.17
CCDC7-209ENST00000539197 GOLGA6L6A8MZA4 724 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 CBX4O00257 560 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 MAFGO15525 162 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 COL10A1Q03692 680 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 BMS1Q14692 1282 aaKnown RBP7.74□□□□□ -1.17
CCDC7-209ENST00000539197 FNDC3BQ53EP0 1204 aaKnown RBP7.74□□□□□ -1.17
CCDC7-209ENST00000539197 LAIR1Q6GTX8 287 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 SLC25A43Q8WUT9 341 aaPredicted RBP7.74□□□□□ -1.17
CCDC7-209ENST00000539197 RTF1Q92541 710 aaKnown RBP7.74□□□□□ -1.17
CCDC7-209ENST00000539197 ZNF512Q96ME7 567 aaPredicted RBP7.74□□□□□ -1.17
CCDC7-209ENST00000539197 MNTQ99583 582 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 SOX7Q9BT81 388 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 OSBPL2Q9H1P3 480 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 POFUT1Q9H488 388 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 MTG2Q9H4K7 406 aa7.74□□□□□ -1.17
CCDC7-209ENST00000539197 C14orf93Q9H972 538 aaKnown RBP7.74□□□□□ -1.17
CCDC7-209ENST00000539197 IPO13O94829 963 aaKnown RBP7.73□□□□□ -1.17
CCDC7-209ENST00000539197 CFBP00751 764 aa7.73□□□□□ -1.17
CCDC7-209ENST00000539197 KRTAP1-1Q07627 177 aa7.73□□□□□ -1.17
CCDC7-209ENST00000539197 ADCY1Q08828 1119 aa7.73□□□□□ -1.17
CCDC7-209ENST00000539197 FAM214AQ32MH5 1076 aa7.73□□□□□ -1.17
CCDC7-209ENST00000539197 RABL3Q5HYI8 236 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms