RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	KCND1	Q9NSA2	647 aa		4.07	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	KCMF1	Q9P0J7	381 aa		4.07	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	TUBD1	Q9UJT1	453 aa		4.07	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	PCDHB6	Q9Y5E3	794 aa		4.07	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CDY2A	Q9Y6F7	541 aa		4.07	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.07	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	TNIK	Q9UKE5	1360 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	AP1G1	O43747	822 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SEMA7A	O75326	666 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	MAP4K4	O95819	1239 aa	Predicted RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	LPO	P22079	712 aa	Predicted RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	XPA	P23025	273 aa	Predicted RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	ADK	P55263	362 aa	Known RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	ANTXR2	P58335	489 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	GTF2H3	Q13889	308 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	DGKD	Q16760	1214 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	IFIT1B	Q5T764	474 aa	Known RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SLC4A10	Q6U841	1118 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CXXC5	Q7LFL8	322 aa	Known RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	BMP8A	Q7Z5Y6	402 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CATIP	Q7Z7H3	387 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784		Q8N3U1	123 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	TTLL6	Q8N841	843 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	OR5AN1	Q8NGI8	311 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	DYDC2	Q96IM9	177 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	HIST1H2AH	Q96KK5	128 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	WRNIP1	Q96S55	665 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	HIST1H2AJ	Q99878	128 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	GCM1	Q9NP62	436 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SLC52A1	Q9NWF4	448 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	EVL	Q9UI08	416 aa	Predicted RBP	4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SERPINB13	Q9UIV8	391 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SYNPO2	Q9UMS6	1093 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	KIF21B	O75037	1637 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	ABCC8	Q09428	1581 aa		4.06	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CCDC194	A0A1B0GVG4	234 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784		H0Y858	1186 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CUTA	O60888	179 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CAND2	O75155	1236 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	OFD1	O75665	1012 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CYP7B1	O75881	506 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	KNG1	P01042	644 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	HSPA6	P17066	643 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	TAL1	P17542	331 aa	Predicted RBP	4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	AKAP5	P24588	427 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	GPR15	P49685	360 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SLC16A1	P53985	500 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	DLG4	P78352	724 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	MGAT5	Q09328	741 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	MAP3K12	Q12852	859 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	ZNF267	Q14586	743 aa	Predicted RBP	4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	ADRM1	Q16186	407 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	ARHGAP29	Q52LW3	1261 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	GRAMD4	Q6IC98	578 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	TRMT10B	Q6PF06	316 aa	Known RBP	4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	LMBR1L	Q6UX01	489 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	LINC00482	Q8N8I6	264 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	FATE1	Q969F0	183 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	COA7	Q96BR5	231 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	AIFM3	Q96NN9	605 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	NMRK2	Q9NPI5	230 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	DMRT3	Q9NQL9	472 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	OBP2A	Q9NY56	170 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SAE1	Q9UBE0	346 aa	Predicted RBP	4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	DNAI1	Q9UI46	699 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	RCAN3	Q9UKA8	241 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CDC42EP3	Q9UKI2	254 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	DNM3	Q9UQ16	869 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SMARCA4	P51532	1647 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CCDC88B	A6NC98	1476 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	GOLGA3	Q08378	1498 aa		4.05	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CLSPN	Q9HAW4	1339 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784		A0A0A6YYK5	440 aa	Predicted RBP	4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784		A0A0G2JNJ9	132 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	NRP2	O60462	931 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	PLA2G1B	P04054	148 aa	Known RBP	4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	KRT18	P05783	430 aa	Known RBP	4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	MYB	P10242	640 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	KCNQ1	P51787	676 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	MLLT6	P55198	1093 aa	Predicted RBP	4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	NRG3	P56975	720 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	MALL	Q13021	153 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	ANO4	Q32M45	955 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	MAP9	Q49MG5	647 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	MUM1L1	Q5H9M0	696 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	KSR2	Q6VAB6	950 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	CCAR1	Q8IX12	1150 aa	Known RBP	4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	TMEFF1	Q8IYR6	380 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	GRAMD1C	Q8IYS0	662 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	NRG4	Q8WWG1	115 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	TIFA	Q96CG3	184 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SOX7	Q9BT81	388 aa		4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	GTPBP4	Q9BZE4	634 aa	Known RBP	4.04	□□□□□ -1.76
CALCOCO2-216	ENST00000509784	SLC12A5	Q9H2X9	1139 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms