RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LARP6Q9BRS8 491 aaKnown RBP26.12■■□□□ 1.77
COL27A1-208ENST00000494780 DDX25Q9UHL0 483 aaKnown RBP26.12■■□□□ 1.77
COL27A1-208ENST00000494780 STK3Q13188 491 aa26.11■■□□□ 1.77
COL27A1-208ENST00000494780 ZNF410Q86VK4 478 aa26.11■■□□□ 1.77
COL27A1-208ENST00000494780 HELQQ8TDG4 1101 aa26.11■■□□□ 1.77
COL27A1-208ENST00000494780 RSPH1Q8WYR4 309 aa26.11■■□□□ 1.77
COL27A1-208ENST00000494780 AIFM3Q96NN9 605 aa26.11■■□□□ 1.77
COL27A1-208ENST00000494780 MRPL9Q9BYD2 267 aaKnown RBP26.11■■□□□ 1.77
COL27A1-208ENST00000494780 TMEM150BA6NC51 233 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 DDX11L8A8MPP1 907 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 SFPQP23246 707 aaKnown RBP eCLIP26.1■■□□□ 1.77
COL27A1-208ENST00000494780 PBX3P40426 434 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 PSMC5P62195 406 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 INF2Q27J81 1249 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 TMC7Q7Z402 723 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 SLC39A11Q8N1S5 342 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 JPH2Q9BR39 696 aaPredicted RBP26.1■■□□□ 1.77
COL27A1-208ENST00000494780 TRAIPQ9BWF2 469 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 INO80BQ9C086 356 aaPredicted RBP26.1■■□□□ 1.77
COL27A1-208ENST00000494780 PDRG1Q9NUG6 133 aa26.1■■□□□ 1.77
COL27A1-208ENST00000494780 A0A087WZ62 844 aa26.09■■□□□ 1.77
COL27A1-208ENST00000494780 HIDE1A8MVS5 230 aa26.09■■□□□ 1.77
COL27A1-208ENST00000494780 MAFO75444 373 aaPredicted RBP26.09■■□□□ 1.77
COL27A1-208ENST00000494780 CSDE1O75534 798 aaKnown RBP26.09■■□□□ 1.77
COL27A1-208ENST00000494780 TECP42680 631 aa26.09■■□□□ 1.77
COL27A1-208ENST00000494780 ANKRD54Q6NXT1 300 aa26.09■■□□□ 1.77
COL27A1-208ENST00000494780 SH2D3AQ9BRG2 576 aa26.09■■□□□ 1.77
COL27A1-208ENST00000494780 FDXACB1Q9BRP7 624 aaPredicted RBP26.09■■□□□ 1.77
COL27A1-208ENST00000494780 S1PR5Q9H228 398 aa26.09■■□□□ 1.77
COL27A1-208ENST00000494780 SUCLA2Q9P2R7 463 aaPredicted RBP26.09■■□□□ 1.77
COL27A1-208ENST00000494780 CDKL5O76039 1030 aa26.08■■□□□ 1.77
COL27A1-208ENST00000494780 ANO5Q75V66 913 aa26.08■■□□□ 1.77
COL27A1-208ENST00000494780 RHPN2Q8IUC4 686 aa26.08■■□□□ 1.77
COL27A1-208ENST00000494780 RPGRIP1Q96KN7 1286 aa26.08■■□□□ 1.77
COL27A1-208ENST00000494780 KCNJ14Q9UNX9 436 aa26.08■■□□□ 1.77
COL27A1-208ENST00000494780 C5orf42Q9H799 3197 aa26.08■■□□□ 1.77
COL27A1-208ENST00000494780 SLC37A4O43826 429 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 SKIP12755 728 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 HOXB8P17481 243 aaPredicted RBP26.07■■□□□ 1.76
COL27A1-208ENST00000494780 PHKA2P46019 1235 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 PPP2R5CQ13362 524 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 SMC1AQ14683 1233 aaKnown RBP26.07■■□□□ 1.76
COL27A1-208ENST00000494780 LETM2Q2VYF4 491 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 TRIM67Q6ZTA4 783 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 BMP8AQ7Z5Y6 402 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 FAM20AQ96MK3 541 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 PHF20Q9BVI0 1012 aa26.07■■□□□ 1.76
COL27A1-208ENST00000494780 TECTAO75443 2155 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 CCDC194A0A1B0GVG4 234 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 CARNS1A5YM72 827 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 DKC1O60832 514 aaKnown RBP eCLIP26.06■■□□□ 1.76
COL27A1-208ENST00000494780 ALDH7A1P49419 539 aaKnown RBP26.06■■□□□ 1.76
COL27A1-208ENST00000494780 BCAR1P56945 870 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 ZXDAP98168 799 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 TWF2Q6IBS0 349 aaKnown RBP26.06■■□□□ 1.76
COL27A1-208ENST00000494780 PPP4R3AQ6IN85 833 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 LLGL2Q6P1M3 1020 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 SYCE2Q6PIF2 218 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 NEK8Q86SG6 692 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 MRPL43Q8N983 215 aaKnown RBP26.06■■□□□ 1.76
COL27A1-208ENST00000494780 FBXL18Q96ME1 805 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 KCNMB3Q9NPA1 279 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 PIEZO1Q92508 2521 aa26.06■■□□□ 1.76
COL27A1-208ENST00000494780 EML1O00423 815 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 GCFC2P16383 781 aaKnown RBP26.05■■□□□ 1.76
COL27A1-208ENST00000494780 XBP1P17861 261 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 QARSP47897 775 aaKnown RBP26.05■■□□□ 1.76
COL27A1-208ENST00000494780 SCRN1Q12765 414 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 BMS1Q14692 1282 aaKnown RBP26.05■■□□□ 1.76
COL27A1-208ENST00000494780 CASP10Q92851 521 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 TMEM169Q96HH4 297 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 CYP26B1Q9NR63 512 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 VAV3Q9UKW4 847 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 PIN4Q9Y237 131 aaKnown RBP26.05■■□□□ 1.76
COL27A1-208ENST00000494780 PPME1Q9Y570 386 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 STK36Q9NRP7 1315 aa26.05■■□□□ 1.76
COL27A1-208ENST00000494780 TMEM221A6NGB7 291 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 C2orf71A6NGG8 1288 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 M0R296 226 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 RAB27AP51159 221 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 PLA2G4FQ68DD2 849 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 CATSPER4Q7RTX7 472 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 EXOC8Q8IYI6 725 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 NLRP4Q96MN2 994 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 SLKQ9H2G2 1235 aaPredicted RBP26.04■■□□□ 1.76
COL27A1-208ENST00000494780 ZNF318Q5VUA4 2279 aa26.04■■□□□ 1.76
COL27A1-208ENST00000494780 TBX3O15119 743 aa26.03■■□□□ 1.76
COL27A1-208ENST00000494780 ZNF623O75123 536 aa26.03■■□□□ 1.76
COL27A1-208ENST00000494780 P4HBP07237 508 aaKnown RBP26.03■■□□□ 1.76
COL27A1-208ENST00000494780 TPRNQ4KMQ1 711 aa26.03■■□□□ 1.76
COL27A1-208ENST00000494780 GLB1LQ6UWU2 654 aa26.03■■□□□ 1.76
COL27A1-208ENST00000494780 KSR1Q8IVT5 923 aa26.03■■□□□ 1.76
COL27A1-208ENST00000494780 SLC7A3Q8WY07 619 aa26.03■■□□□ 1.76
COL27A1-208ENST00000494780 NAP1L4Q99733 375 aaKnown RBP26.03■■□□□ 1.76
COL27A1-208ENST00000494780 FAM105AQ9NUU6 356 aa26.03■■□□□ 1.76
COL27A1-208ENST00000494780 NT5C1B-RDH14C9J2C7 533 aa26.02■■□□□ 1.76
COL27A1-208ENST00000494780 NHLH1Q02575 133 aa26.02■■□□□ 1.76
COL27A1-208ENST00000494780 LPPQ93052 612 aa26.02■■□□□ 1.76
COL27A1-208ENST00000494780 PBXIP1Q96AQ6 731 aa26.02■■□□□ 1.76
COL27A1-208ENST00000494780 APOL5Q9BWW9 433 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms