RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 RNF149Q8NC42 400 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 URGCPQ8TCY9 931 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 HELQQ8TDG4 1101 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 TNFRSF25Q93038 417 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 ZNF689Q96CS4 500 aaPredicted RBP12.51□□□□□ -0.41
SORT1-204ENST00000482236 ZNF558Q96NG5 402 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 TRIM6Q9C030 488 aaPredicted RBP12.51□□□□□ -0.41
SORT1-204ENST00000482236 TMEM117Q9H0C3 514 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 CDH23Q9H251 3354 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 ARHGEF35A5YM69 484 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 C9IYK1 514 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 C5orf67F2Z3F1 127 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 H3BQ06 376 aaPredicted RBP12.5□□□□□ -0.41
SORT1-204ENST00000482236 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 SRGAP2BP0DMP2 458 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 PPM1AP35813 382 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 MCM2P49736 904 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 KRT17Q04695 432 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 ST3GAL1Q11201 340 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
SORT1-204ENST00000482236 CLUL1Q15846 466 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 NAALADL2Q58DX5 795 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 B3GNT9Q6UX72 402 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 MAEAQ7L5Y9 396 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 ECHDC2Q86YB7 292 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 LINC01465Q8N7H1 131 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 POF1BQ8WVV4 589 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 PRPF31Q8WWY3 499 aaKnown RBP12.5□□□□□ -0.41
SORT1-204ENST00000482236 CLP1Q92989 425 aaKnown RBP12.5□□□□□ -0.41
SORT1-204ENST00000482236 PGBD4Q96DM1 585 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 FAM193BQ96PV7 902 aaPredicted RBP12.5□□□□□ -0.41
SORT1-204ENST00000482236 GBP3Q9H0R5 595 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 ELAC1Q9H777 363 aaKnown RBP12.5□□□□□ -0.41
SORT1-204ENST00000482236 CHST12Q9NRB3 414 aa12.5□□□□□ -0.41
SORT1-204ENST00000482236 TYW1Q9NV66 732 aaKnown RBP12.5□□□□□ -0.41
SORT1-204ENST00000482236 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
SORT1-204ENST00000482236 LRRIQ4A6NIV6 560 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 ASAP2O43150 1006 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 ZC3H11AO75152 810 aaKnown RBP eCLIP12.49□□□□□ -0.41
SORT1-204ENST00000482236 DGAT1O75907 488 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 FGF18O76093 207 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 LIG1P18858 919 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 CCT6AP40227 531 aaKnown RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 LAMTOR4Q0VGL1 99 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 ORC2Q13416 577 aaPredicted RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 MXD4Q14582 209 aaPredicted RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 PTCRAQ6ISU1 281 aaPredicted RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 SRGAP1Q7Z6B7 1085 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 RBM23Q86U06 439 aaKnown RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 ZBTB8OSQ8IWT0 167 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 COLGALT1Q8NBJ5 622 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 FBXO18Q8NFZ0 1043 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 PIGOQ8TEQ8 1089 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 P2RX5Q93086 422 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 NECAB3Q96P71 396 aaPredicted RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 TLR9Q9NR96 1032 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 WRAP73Q9P2S5 460 aaPredicted RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 PLAGL2Q9UPG8 496 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.49□□□□□ -0.41
SORT1-204ENST00000482236 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
SORT1-204ENST00000482236 EOMESO95936 686 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 ITGB1P05556 798 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 NRIP1P48552 1158 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 TRAPPC10P48553 1259 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 ALDH7A1P49419 539 aaKnown RBP12.48□□□□□ -0.41
SORT1-204ENST00000482236 PUS10Q3MIT2 529 aaKnown RBP12.48□□□□□ -0.41
SORT1-204ENST00000482236 PLPP4Q5VZY2 271 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
SORT1-204ENST00000482236 RASSF8Q8NHQ8 419 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 PABPC5Q96DU9 382 aaKnown RBP12.48□□□□□ -0.41
SORT1-204ENST00000482236 TMEM169Q96HH4 297 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 CDK5RAP3Q96JB5 506 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 NACC1Q96RE7 527 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 TMEM60Q9H2L4 133 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 DHX33Q9H6R0 707 aaKnown RBP12.48□□□□□ -0.41
SORT1-204ENST00000482236 TLE6Q9H808 572 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 TUFT1Q9NNX1 390 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 ANKEF1Q9NU02 776 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 FAM105AQ9NUU6 356 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
SORT1-204ENST00000482236 EVPLQ92817 2033 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 NLRC5Q86WI3 1866 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 IGKV6-21A0A0C4DH24 114 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 A0A0U1RQF3 1178 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 SLITRK3O94933 977 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 STBD1O95210 358 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 GJB2P29033 226 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 UBE3AQ05086 875 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 SPIRE1Q08AE8 756 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 DSC3Q14574 896 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 NBR1Q14596 966 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
SORT1-204ENST00000482236 TMC7Q7Z402 723 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms