RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 C11orf57Q6ZUT1 292 aaPredicted RBP13□□□□□ -0.33
AC009404.1-202ENST00000439955 GJD3Q8N144 294 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 AFAP1L1Q8TED9 768 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 GDPD5Q8WTR4 605 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 SEPT1Q8WYJ6 367 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 DNAJC19Q96DA6 116 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 TIPINQ9BVW5 301 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 AP5M1Q9H0R1 490 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 BHMT2Q9H2M3 363 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 MLXIPQ9HAP2 919 aa13□□□□□ -0.33
AC009404.1-202ENST00000439955 WRAP73Q9P2S5 460 aaPredicted RBP13□□□□□ -0.33
AC009404.1-202ENST00000439955 ARHGEF35A5YM69 484 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 LPXNO60711 386 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 CABYRO75952 493 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 GH1P01241 217 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 SSBP05455 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 SMPD1P17405 629 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 ERCC5P28715 1186 aaPredicted RBP12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 YWHABP31946 246 aaKnown RBP12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 UGCGQ16739 394 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 OTUD6AQ7L8S5 288 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 HERC6Q8IVU3 1022 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 CCDC60Q8IWA6 550 aaPredicted RBP12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 CCDC65Q8IXS2 484 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 DHX37Q8IY37 1157 aaKnown RBP12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 PIGOQ8TEQ8 1089 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 FBXL18Q96ME1 805 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 BCAS3Q9H6U6 928 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 CBX8Q9HC52 389 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 PDGFCQ9NRA1 345 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 GABBR1Q9UBS5 961 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 MTUS1Q9ULD2 1270 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 ODF2LQ9ULJ1 636 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 GNEQ9Y223 722 aaKnown RBP12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 PPME1Q9Y570 386 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 MAFBQ9Y5Q3 323 aaPredicted RBP12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
AC009404.1-202ENST00000439955 GSTTP1A0A1W2PQM5 241 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 LCHNA4D1U4 455 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 NOP56O00567 594 aaKnown RBP12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 BACH1O14867 736 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 IKBKBO14920 756 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 LGR5O75473 907 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 KRT18P05783 430 aaKnown RBP12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 IL9P15248 144 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 GUCY2CP25092 1073 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 RARRES1P49788 294 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 SLC26A2P50443 739 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 NKX3-2P78367 333 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 ARHGAP1Q07960 439 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 STIM1Q13586 685 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 IQCB1Q15051 598 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 DUSP28Q4G0W2 176 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 ARSHQ5FYA8 562 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 RINT1Q6NUQ1 792 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 SWSAP1Q6NVH7 229 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 C1orf186Q6ZWK4 172 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 DYMQ7RTS9 669 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 FAM167AQ96KS9 214 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 CCDC43Q96MW1 224 aaKnown RBP12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 GPR20Q99678 358 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 UBE2ZQ9H832 354 aaPredicted RBP12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 ZNF302Q9NR11 478 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 PANK4Q9NVE7 773 aa12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 MYH9P35579 1960 aaKnown RBP12.98□□□□□ -0.33
AC009404.1-202ENST00000439955 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 ZNF862O60290 1169 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 STBD1O95210 358 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 PFKMP08237 780 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 ACTN1P12814 892 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 IDEP14735 1019 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 GAP43P17677 238 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 KCNA5P22460 613 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 TCF7P36402 384 aaPredicted RBP12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 ZNF131P52739 623 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 PRKCEQ02156 737 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 COASYQ13057 564 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 GIT2Q14161 759 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 PLPPR4Q7Z2D5 763 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 FAM178BQ8IXR5 827 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 RNF214Q8ND24 703 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 PPTC7Q8NI37 304 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 ENOX1Q8TC92 643 aaKnown RBP12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 SPATA33Q96N06 139 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 REEP2Q9BRK0 252 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 RUSC1Q9BVN2 902 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 AZI2Q9H6S1 392 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 SEL1LQ9UBV2 794 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 Q9Y3F1 56 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 COL4A3BPQ9Y5P4 624 aa12.97□□□□□ -0.33
AC009404.1-202ENST00000439955 A0A087WWV3 80 aa12.96□□□□□ -0.33
AC009404.1-202ENST00000439955 BECN2A8MW95 431 aa12.96□□□□□ -0.33
AC009404.1-202ENST00000439955 ZEB2O60315 1214 aa12.96□□□□□ -0.33
AC009404.1-202ENST00000439955 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.33
AC009404.1-202ENST00000439955 OATP04181 439 aa12.96□□□□□ -0.33
AC009404.1-202ENST00000439955 HOXD8P13378 290 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms