RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KIFC3Q9BVG8 833 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 GBP3Q9H0R5 595 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 SUGCTQ9HAC7 445 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 A0A1B0GTH6 734 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 F2P00734 622 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 GLRA2P23416 452 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 IGBP1P78318 339 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 IRX5P78411 483 aaPredicted RBP17.15■□□□□ 0.34
CTSA-202ENST00000354880 ADAM9Q13443 819 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 FILIP1LQ4L180 1135 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 HS2ST1Q7LGA3 356 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 DRC7Q8IY82 874 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 SYCP3Q8IZU3 236 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 LRRC71Q8N4P6 559 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 PXYLP1Q8TE99 480 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 ARHGAP28Q9P2N2 729 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 KAT6AQ92794 2004 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 ADGRA3Q8IWK6 1321 aa17.15■□□□□ 0.34
CTSA-202ENST00000354880 DENND3A2RUS2 1198 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 H0YCG3 227 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 CETN3O15182 167 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 C22orf31O95567 290 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 NR2F2P24468 414 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 ABCD1P33897 745 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 NAMPTP43490 491 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 GJA9P57773 515 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 BEX3Q00994 111 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 DRP2Q13474 957 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 FILIP1Q7Z7B0 1213 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 SPC24Q8NBT2 197 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 RETREG2Q8NC44 543 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 GOLGA5Q8TBA6 731 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.34
CTSA-202ENST00000354880 KAT2BQ92831 832 aa17.14■□□□□ 0.34
CTSA-202ENST00000354880 BRCA2P51587 3418 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 EVPLQ92817 2033 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 MAGEB2O15479 319 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
CTSA-202ENST00000354880 RARBP10826 455 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 SCP2P22307 547 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 RPL13P26373 211 aaKnown RBP17.14■□□□□ 0.33
CTSA-202ENST00000354880 DNM2P50570 870 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 COPB1P53618 953 aaKnown RBP17.14■□□□□ 0.33
CTSA-202ENST00000354880 PRMT2P55345 433 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 PPFIA1Q13136 1202 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 MKRN4PQ13434 485 aaPredicted RBP17.14■□□□□ 0.33
CTSA-202ENST00000354880 MXD4Q14582 209 aaPredicted RBP17.14■□□□□ 0.33
CTSA-202ENST00000354880 NR1I3Q14994 352 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 NFIL3Q16649 462 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 EFCAB12Q6NXP0 572 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
CTSA-202ENST00000354880 IKZF4Q9H2S9 585 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 SPC25Q9HBM1 224 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 INTS13Q9NVM9 706 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 TAB2Q9NYJ8 693 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 TBX20Q9UMR3 447 aa17.14■□□□□ 0.33
CTSA-202ENST00000354880 DNAH12Q6ZR08 3092 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 LRRIQ4A6NIV6 560 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 N4BP3O15049 544 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 CLIC2O15247 247 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 GNA14O95837 355 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 NR3C1P04150 777 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 MYL3P08590 195 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 KLRC1P26715 233 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 CCND3P30281 292 aaPredicted RBP17.13■□□□□ 0.33
CTSA-202ENST00000354880 MTIF2P46199 727 aaKnown RBP17.13■□□□□ 0.33
CTSA-202ENST00000354880 GRIK4Q16099 956 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 MAP3K21Q5TCX8 1036 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 MAP4K3Q8IVH8 894 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 METTL13Q8N6R0 699 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 TUBGCP2Q9BSJ2 902 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 VPS16Q9H269 839 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
CTSA-202ENST00000354880 AGPAT3Q9NRZ7 376 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 TSKSQ9UJT2 592 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 EXOC7Q9UPT5 735 aa17.13■□□□□ 0.33
CTSA-202ENST00000354880 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
CTSA-202ENST00000354880 CAPSQ13938 189 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 MFSD10Q14728 455 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 DEPTORQ8TB45 409 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 KCNN1Q92952 543 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 UPF3AQ9H1J1 476 aaKnown RBP17.12■□□□□ 0.33
CTSA-202ENST00000354880 CGNQ9P2M7 1197 aaKnown RBP17.12■□□□□ 0.33
CTSA-202ENST00000354880 SUCLA2Q9P2R7 463 aaPredicted RBP17.12■□□□□ 0.33
CTSA-202ENST00000354880 MYADML2A6NDP7 307 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 RRN3P2A6NIE6 340 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 KPNA6O60684 536 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 TPM2P07951 284 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 PRKCSHP14314 528 aaPredicted RBP17.12■□□□□ 0.33
CTSA-202ENST00000354880 CLCN3P51790 818 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 CHMP4BP1P59074 171 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 SNRPFP62306 86 aaKnown RBP17.12■□□□□ 0.33
CTSA-202ENST00000354880 LAMTOR4Q0VGL1 99 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 GNASQ5JWF2 1037 aa17.12■□□□□ 0.33
CTSA-202ENST00000354880 MTHFD1LQ6UB35 978 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms