RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 DENND3A2RUS2 1198 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TEX33O43247 280 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 MTIF2P46199 727 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 CPT1AP50416 773 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TMC6Q7Z403 805 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 FILIP1Q7Z7B0 1213 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ZC3H3Q8IXZ2 948 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 ZNF296Q8WUU4 475 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TUBGCP2Q9BSJ2 902 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 GBP3Q9H0R5 595 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 TMEM206Q9H813 350 aa16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-201ENST00000338399 N4BP3O15049 544 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CETN3O15182 167 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GAS2O43903 313 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 ADCY3O60266 1144 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 DUSP11O75319 330 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 NR3C1P04150 777 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CHMP4BP1P59074 171 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 BRDTQ58F21 947 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 IER5Q5VY09 327 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 HS2ST1Q7LGA3 356 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TCP11Q8WWU5 503 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PRPF31Q8WWY3 499 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TRIM44Q96DX7 344 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 JPH2Q9BR39 696 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TBX20Q9UMR3 447 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 LRRIQ4A6NIV6 560 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SEPT4O43236 478 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 C22orf31O95567 290 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GNRH1P01148 92 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MYL3P08590 195 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PRKAR2AP13861 404 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 NAMPTP43490 491 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PPP2R5AQ15172 486 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 FSCN1Q16658 493 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 EFCAB12Q6NXP0 572 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 VSTM4Q8IW00 320 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 METTL13Q8N6R0 699 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 KAT2BQ92831 832 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 ARHGAP28Q9P2N2 729 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 KCNG1Q9UIX4 513 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TSKSQ9UJT2 592 aa16.2■□□□□ 0.18
CDK5RAP3-201ENST00000338399 COL1A2P08123 1366 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GOLGA6L6A8MZA4 724 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PES1O00541 588 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 C6orf222P0C671 652 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 RPL13P26373 211 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 KLRC1P26715 233 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CCND3P30281 292 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PPFIA1Q13136 1202 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CAPSQ13938 189 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CCDC40Q4G0X9 1142 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 DEPTORQ8TB45 409 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 HVCN1Q96D96 273 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 NOC4LQ9BVI4 516 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SUCLA2Q9P2R7 463 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TISP43B9A030 160 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GNA14O95837 355 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 F2P00734 622 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TPM2P07951 284 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CLCN3P51790 818 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GRIK4Q16099 956 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 NFIL3Q16649 462 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CEP135Q66GS9 1140 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CCDC186Q7Z3E2 898 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 RETREG2Q8NC44 543 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GOLGA5Q8TBA6 731 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PPP1R13LQ8WUF5 828 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PSPC1Q8WXF1 523 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CENPFP49454 3210 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 H0YCG3 227 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 HMGCRP04035 888 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CASP4P49662 377 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 DNM2P50570 870 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 CYP2J2P51589 502 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GJA9P57773 515 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 LAMTOR4Q0VGL1 99 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MXD4Q14582 209 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MFSD10Q14728 455 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 TAS1R3Q7RTX0 852 aa16.18■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SIP14410 1827 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 LGALS16A8MUM7 142 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 MAGEB2O15479 319 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 AKAP3O75969 853 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PGK1P00558 417 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 GJB1P08034 283 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 SRGAP2CP0DJJ0 459 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 RARBP10826 455 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 PSEN2P49810 448 aa16.17■□□□□ 0.18
CDK5RAP3-201ENST00000338399 UBXN1Q04323 297 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms