RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SH2D3AQ9BRG2 576 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 PCIF1Q9H4Z3 704 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 CNOT7Q9UIV1 285 aaKnown RBP21.75■■□□□ 1.07
CXCL16-201ENST00000293778 ADAM21Q9UKJ8 722 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 INTUQ9ULD6 942 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 GJA3Q9Y6H8 435 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 PSMC5P62195 406 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 RPS6KA1Q15418 735 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 GLE1Q53GS7 698 aaKnown RBP21.75■■□□□ 1.07
CXCL16-201ENST00000293778 DCAF15Q66K64 600 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 INPP4AQ96PE3 977 aaPredicted RBP21.75■■□□□ 1.07
CXCL16-201ENST00000293778 TIPINQ9BVW5 301 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 DAAM1Q9Y4D1 1078 aa21.75■■□□□ 1.07
CXCL16-201ENST00000293778 TESPA1A2RU30 521 aaPredicted RBP21.74■■□□□ 1.07
CXCL16-201ENST00000293778 TMEM150BA6NC51 233 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 WDR64B1ANS9 1081 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 TISP43B9A030 160 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 BACH1O14867 736 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 AARSP49588 968 aaKnown RBP eCLIP21.74■■□□□ 1.07
CXCL16-201ENST00000293778 KRT76Q01546 638 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 INTS8Q75QN2 995 aaKnown RBP21.74■■□□□ 1.07
CXCL16-201ENST00000293778 HAUS6Q7Z4H7 955 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 FMNL3Q8IVF7 1028 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 C12orf56Q8IXR9 622 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 LRRC57Q8N9N7 239 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 WNK4Q96J92 1243 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 RNF146Q9NTX7 359 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 FAN1Q9Y2M0 1017 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 CCNE2O96020 404 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 SFNP31947 248 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 BACE1P56817 501 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 SCYL3Q8IZE3 742 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 SLC30A5Q8TAD4 765 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 LNX1Q8TBB1 728 aaPredicted RBP21.74■■□□□ 1.07
CXCL16-201ENST00000293778 TMEM174Q8WUU8 243 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 EXOC4Q96A65 974 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 GPR88Q9GZN0 384 aa21.74■■□□□ 1.07
CXCL16-201ENST00000293778 PPP1R1BQ9UD71 204 aaPredicted RBP21.74■■□□□ 1.07
CXCL16-201ENST00000293778 A0A0A6YYK5 440 aaPredicted RBP21.73■■□□□ 1.07
CXCL16-201ENST00000293778 KIF4AO95239 1232 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 CCDC172P0C7W6 258 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 LMNB1P20700 586 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 BAATQ14032 418 aaPredicted RBP21.73■■□□□ 1.07
CXCL16-201ENST00000293778 TPCN2Q8NHX9 752 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 OLIG1Q8TAK6 271 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 CBWD1Q9BRT8 395 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 ST6GALNAC4Q9H4F1 302 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 AS3MTQ9HBK9 375 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 RIPK3Q9Y572 518 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 DOCK1Q14185 1865 aa21.73■■□□□ 1.07
CXCL16-201ENST00000293778 ERICH4A6NGS2 130 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 CES2O00748 559 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 DLG4P78352 724 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 GTF2BQ00403 316 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 XKR9Q5GH70 373 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 TRMT1LQ7Z2T5 733 aaKnown RBP21.72■■□□□ 1.07
CXCL16-201ENST00000293778 GLYCTKQ8IVS8 523 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 GOLPH3Q9H4A6 298 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 GPRC5CQ9NQ84 441 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 BRCA1P38398 1863 aaKnown RBP21.72■■□□□ 1.07
CXCL16-201ENST00000293778 KCNK3O14649 394 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 RFX1P22670 979 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 VAMP7P51809 220 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 PEX3P56589 373 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 XRRA1Q6P2D8 792 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 XXYLT1Q8NBI6 393 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 ZNF280CQ8ND82 737 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 LMO3Q8TAP4 145 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 LMBR1Q8WVP7 490 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 ZKSCAN4Q969J2 545 aaPredicted RBP21.72■■□□□ 1.07
CXCL16-201ENST00000293778 PICK1Q9NRD5 415 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 ANKEF1Q9NU02 776 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 HSPBP1Q9NZL4 362 aa21.72■■□□□ 1.07
CXCL16-201ENST00000293778 EMSYQ7Z589 1322 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 SLC16A4O15374 487 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 CCND2P30279 289 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 ARHGAP44Q17R89 818 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 PLA2G4FQ68DD2 849 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 PHLDB3Q6NSJ2 640 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 IWS1Q96ST2 819 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 ZNF112Q9UJU3 913 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 ZC3H4Q9UPT8 1303 aaKnown RBP21.71■■□□□ 1.07
CXCL16-201ENST00000293778 PHACTR2O75167 634 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 TNFRSF8P28908 595 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 GALCP54803 685 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 NPEPPSP55786 919 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 FAM102BQ5T8I3 360 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 SND1Q7KZF4 910 aaKnown RBP eCLIP21.71■■□□□ 1.07
CXCL16-201ENST00000293778 PBKQ96KB5 322 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 WRNIP1Q96S55 665 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 SYT11Q9BT88 431 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 BCS1LQ9Y276 419 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 PARP14Q460N5 1801 aa21.71■■□□□ 1.07
CXCL16-201ENST00000293778 PTPRAP18433 802 aa21.7■■□□□ 1.06
CXCL16-201ENST00000293778 NCKAP1LP55160 1127 aa21.7■■□□□ 1.06
CXCL16-201ENST00000293778 RNASE9P60153 205 aaKnown RBP21.7■■□□□ 1.06
CXCL16-201ENST00000293778 SNRPFP62306 86 aaKnown RBP21.7■■□□□ 1.06
CXCL16-201ENST00000293778 CETN1Q12798 172 aa21.7■■□□□ 1.06
CXCL16-201ENST00000293778 SNRNP48Q6IEG0 339 aaKnown RBP21.7■■□□□ 1.06
CXCL16-201ENST00000293778 NLRX1Q86UT6 975 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms