RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 TOGARAM2Q6ZUX3 1019 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 HDDC2Q7Z4H3 204 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 EXOSC4Q9NPD3 245 aaKnown RBP13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 USP21Q9UK80 565 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 CIITAP33076 1130 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 FAM182BQ5T319 152 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 ANKRD40Q6AI12 368 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 ENAHQ8N8S7 591 aaPredicted RBP13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 CYGBQ8WWM9 190 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 ZNF212Q9UDV6 495 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 UBE4BO95155 1302 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 FOSP01100 380 aaPredicted RBP13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 CHRNA3P32297 505 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 IFNEQ86WN2 208 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 RNPEPQ9H4A4 650 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 NDE1Q9NXR1 346 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 C6orf203Q9P0P8 240 aaPredicted RBP13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 IPO5O00410 1097 aaKnown RBP13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 HSPA1AP0DMV8 641 aaKnown RBP13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 HSPA1BP0DMV9 641 aaKnown RBP13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 GYS1P13807 737 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 ADORA2BP29275 332 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 COG1Q8WTW3 980 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 TRIM33Q9UPN9 1127 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 SNAPC4Q5SXM2 1469 aa13.25□□□□□ -0.29
ARFGEF1-201ENST00000262215 SUPT3HB4E1H0 165 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 ENO1P06733 434 aaKnown RBP13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 ARFIP2P53365 341 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 BTKQ06187 659 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 GALNT17Q6IS24 598 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 TRAF7Q6Q0C0 670 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 PLD3Q8IV08 490 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 ANKMY2Q8IV38 441 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 ZBED8Q8IZ13 594 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 RMDN1Q96DB5 314 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 TMA16Q96EY4 203 aaKnown RBP13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 F8W8V4 182 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 GCLMP48507 274 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 CCDC15Q0P6D6 951 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 GPS1Q13098 491 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 USPL1Q5W0Q7 1092 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 TTC23LQ6PF05 361 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 MTBPQ96DY7 904 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 C11orf70Q9BRQ4 267 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 NDST4Q9H3R1 872 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 C19orf44Q9H6X5 657 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 CARMIL3Q8ND23 1372 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 CCDC92Q53HC0 331 aaPredicted RBP13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 ANO5Q75V66 913 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 C11orf96Q7Z7L8 435 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 THAP11Q96EK4 314 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 PIDD1Q9HB75 910 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 COPG1Q9Y678 874 aaKnown RBP13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 MAP4P27816 1152 aaKnown RBP13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 SLC39A14Q15043 492 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 BHMT2Q9H2M3 363 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 DNAJC12Q9UKB3 198 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 PCDHGB4Q9UN71 923 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 TRIM66O15016 1216 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 PPP3CCP48454 512 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 PDIA2Q13087 525 aaKnown RBP13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 KIZQ2M2Z5 673 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 EHD2Q9NZN4 543 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 PHLPP2Q6ZVD8 1323 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 LZTS3O60299 673 aaPredicted RBP13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 GALNT4Q8N4A0 578 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 SP110Q9HB58 689 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 KLHL11Q9NVR0 708 aa13.24□□□□□ -0.29
ARFGEF1-201ENST00000262215 TRIM49BA6NDI0 452 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 KRT38O76015 456 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 FMNL1O95466 1100 aaPredicted RBP13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 KCNA6P17658 529 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 PKN3Q6P5Z2 889 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 PI16Q6UXB8 463 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 HSPBP1Q9NZL4 362 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 ZNF804BA4D1E1 1349 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 NPATQ14207 1427 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 H0Y626 953 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 TRIM16O95361 564 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 TM6SF1Q9BZW5 370 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 TRIM45Q9H8W5 580 aaPredicted RBP13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 ADD3Q9UEY8 706 aaKnown RBP13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 POLR3AO14802 1390 aaPredicted RBP13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 RASSF10A6NK89 507 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 PSAPP07602 524 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 THEM5Q8N1Q8 247 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 SRPK1Q96SB4 655 aaKnown RBP13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 ABCC4O15439 1325 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 BMP3P12645 472 aa13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 TWF2Q6IBS0 349 aaKnown RBP13.23□□□□□ -0.29
ARFGEF1-201ENST00000262215 ARMC2Q8NEN0 867 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms