RNA–Protein interactions for RNA: YPR138C

MEP3, Transcript of Ammonium permease of high capacity and low affinity, yeast

Gene MEP3, Length 1,470 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MEP3	YPR138C	TPD3	P31383	635 aa		11.8	□□□□□ -0.52
MEP3	YPR138C	NTH2	P35172	780 aa		11.8	□□□□□ -0.52
MEP3	YPR138C	RCR1	P38212	213 aa		11.8	□□□□□ -0.52
MEP3	YPR138C	YNL050C	P53952	270 aa		11.8	□□□□□ -0.52
MEP3	YPR138C	RTT109	Q07794	436 aa		11.8	□□□□□ -0.52
MEP3	YPR138C	HSP104	P31539	908 aa	Known RBP	11.79	□□□□□ -0.52
MEP3	YPR138C	IES2	P40154	320 aa		11.79	□□□□□ -0.52
MEP3	YPR138C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.78	□□□□□ -0.52	not detected
MEP3	YPR138C	AOS1	Q06624	347 aa		11.76	□□□□□ -0.53
MEP3	YPR138C	IMH1	Q06704	911 aa	Known RBP	11.76	□□□□□ -0.53
MEP3	YPR138C	ROM2	P51862	1356 aa	Known RBP	11.76	□□□□□ -0.53
MEP3	YPR138C	MAM1	P40065	302 aa		11.74	□□□□□ -0.53
MEP3	YPR138C	INP54	Q08227	384 aa	Known RBP	11.74	□□□□□ -0.53
MEP3	YPR138C	EDE1	P34216	1381 aa		11.73	□□□□□ -0.53
MEP3	YPR138C	MEC3	Q02574	474 aa		11.73	□□□□□ -0.53
MEP3	YPR138C	NUP145	P49687	1317 aa		11.73	□□□□□ -0.53
MEP3	YPR138C	CAB3	P36076	571 aa		11.71	□□□□□ -0.53
MEP3	YPR138C	ZDS1	P50111	915 aa	Known RBP	11.71	□□□□□ -0.53
MEP3	YPR138C	LYS2	P07702	1392 aa		11.71	□□□□□ -0.53
MEP3	YPR138C	YKL133C	P36066	463 aa		11.7	□□□□□ -0.54
MEP3	YPR138C	GYP7	P48365	746 aa		11.7	□□□□□ -0.54
MEP3	YPR138C	ADE16	P54113	591 aa	Known RBP	11.7	□□□□□ -0.54
MEP3	YPR138C	UGA3	P26370	528 aa		11.69	□□□□□ -0.54
MEP3	YPR138C	EBP2	P36049	427 aa	Known RBP	11.69	□□□□□ -0.54
MEP3	YPR138C	FUN12	P39730	1002 aa	Known RBP	11.69	□□□□□ -0.54
MEP3	YPR138C	KCC4	P25389	1037 aa		11.68	□□□□□ -0.54
MEP3	YPR138C	RRT14	P40470	206 aa		11.68	□□□□□ -0.54
MEP3	YPR138C	YIL055C	P40523	627 aa	Known RBP	11.68	□□□□□ -0.54
MEP3	YPR138C	YFR016C	P43597	1233 aa	Known RBP	11.68	□□□□□ -0.54
MEP3	YPR138C	MAK21	Q12176	1025 aa	Known RBP	11.68	□□□□□ -0.54
MEP3	YPR138C	YIL092W	P40497	633 aa		11.67	□□□□□ -0.54
MEP3	YPR138C	RAD2	P07276	1031 aa		11.65	□□□□□ -0.54
MEP3	YPR138C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.65	□□□□□ -0.54	not detected
MEP3	YPR138C	NSE3	Q05541	303 aa		11.65	□□□□□ -0.54
MEP3	YPR138C	OSM1	P21375	501 aa	Known RBP	11.64	□□□□□ -0.55
MEP3	YPR138C	DOT5	P40553	215 aa		11.64	□□□□□ -0.55
MEP3	YPR138C	FRK1	Q03002	865 aa	Predicted RBP	11.64	□□□□□ -0.55
MEP3	YPR138C	SRT1	Q03175	343 aa		11.64	□□□□□ -0.55
MEP3	YPR138C	BMS1	Q08965	1183 aa	Known RBP	11.64	□□□□□ -0.55
MEP3	YPR138C	FOX2	Q02207	900 aa	Known RBP	11.63	□□□□□ -0.55
MEP3	YPR138C	UTP10	P42945	1769 aa	Known RBP	11.63	□□□□□ -0.55
MEP3	YPR138C	COQ4	O13525	335 aa		11.63	□□□□□ -0.55
MEP3	YPR138C	DAL5	P15365	543 aa		11.61	□□□□□ -0.55
MEP3	YPR138C	ATG13	Q06628	738 aa		11.61	□□□□□ -0.55
MEP3	YPR138C	YBR287W	P38355	427 aa		11.59	□□□□□ -0.55
MEP3	YPR138C	COB	P00163	385 aa		11.58	□□□□□ -0.56
MEP3	YPR138C	RPL17A	P05740	184 aa	Known RBP	11.57	□□□□□ -0.56
MEP3	YPR138C	YKR075C	P36155	307 aa		11.57	□□□□□ -0.56
MEP3	YPR138C	FPR3	P38911	411 aa	Known RBP	11.57	□□□□□ -0.56
MEP3	YPR138C	RPL17B	P46990	184 aa	Known RBP	11.57	□□□□□ -0.56
MEP3	YPR138C	YBP2	P53169	641 aa		11.57	□□□□□ -0.56
MEP3	YPR138C	YOL057W	Q08225	711 aa		11.57	□□□□□ -0.56
MEP3	YPR138C	ALE1	Q08548	619 aa		11.57	□□□□□ -0.56
MEP3	YPR138C	YPP1	P46951	817 aa		11.56	□□□□□ -0.56
MEP3	YPR138C	POL32	P47110	350 aa		11.55	□□□□□ -0.56
MEP3	YPR138C	RMT2	Q03305	412 aa		11.55	□□□□□ -0.56
MEP3	YPR138C	RAD4	P14736	754 aa		11.54	□□□□□ -0.56
MEP3	YPR138C	YMR074C	Q04773	145 aa		11.53	□□□□□ -0.56
MEP3	YPR138C	GRX1	P25373	110 aa	Known RBP	11.52	□□□□□ -0.56
MEP3	YPR138C	YDR306C	Q06640	478 aa		11.52	□□□□□ -0.56
MEP3	YPR138C	LAM6	Q08001	693 aa		11.52	□□□□□ -0.56
MEP3	YPR138C	TRP5	P00931	707 aa	Known RBP	11.51	□□□□□ -0.57
MEP3	YPR138C	RPS19A	P07280	144 aa	Known RBP	11.51	□□□□□ -0.57
MEP3	YPR138C	RPS19B	P07281	144 aa	Predicted RBP	11.51	□□□□□ -0.57
MEP3	YPR138C	CSI1	Q04368	295 aa		11.51	□□□□□ -0.57
MEP3	YPR138C	RPN11	P43588	306 aa	Known RBP	11.5	□□□□□ -0.57
MEP3	YPR138C	NOP53	Q12080	455 aa	Known RBP	11.5	□□□□□ -0.57
MEP3	YPR138C	MRP7	P12687	371 aa		11.49	□□□□□ -0.57
MEP3	YPR138C	PRP40	P33203	583 aa	Known RBP	11.49	□□□□□ -0.57
MEP3	YPR138C	TUM1	Q08686	304 aa	Known RBP	11.49	□□□□□ -0.57
MEP3	YPR138C	GLN1	P32288	370 aa	Known RBP	11.48	□□□□□ -0.57
MEP3	YPR138C	DNM1	P54861	757 aa		11.48	□□□□□ -0.57
MEP3	YPR138C	PUF6	Q04373	656 aa	Known RBP	11.48	□□□□□ -0.57
MEP3	YPR138C	SSP2	Q08646	371 aa		11.48	□□□□□ -0.57
MEP3	YPR138C	YJR008W	P47085	338 aa		11.47	□□□□□ -0.57
MEP3	YPR138C	MDG1	P53885	366 aa		11.47	□□□□□ -0.57
MEP3	YPR138C	ZDS2	P54786	942 aa		11.47	□□□□□ -0.57
MEP3	YPR138C	SWI1	P09547	1314 aa		11.46	□□□□□ -0.57
MEP3	YPR138C	CST6	P40535	587 aa		11.46	□□□□□ -0.57
MEP3	YPR138C	RAD24	P32641	659 aa		11.45	□□□□□ -0.58
MEP3	YPR138C	YJL181W	P46987	611 aa		11.45	□□□□□ -0.58
MEP3	YPR138C	PHM7	Q12252	991 aa		11.45	□□□□□ -0.58
MEP3	YPR138C	NPR2	P39923	615 aa		11.44	□□□□□ -0.58
MEP3	YPR138C	YGR122W	P53272	402 aa		11.44	□□□□□ -0.58
MEP3	YPR138C	NOP8	Q08287	484 aa	Predicted RBP	11.44	□□□□□ -0.58
MEP3	YPR138C	YNG2	P38806	282 aa	Known RBP	11.44	□□□□□ -0.58
MEP3	YPR138C	MSB4	Q12317	492 aa		11.44	□□□□□ -0.58
MEP3	YPR138C	BOI2	P39969	1040 aa		11.43	□□□□□ -0.58
MEP3	YPR138C	NUP133	P36161	1157 aa		11.42	□□□□□ -0.58
MEP3	YPR138C	ILV3	P39522	585 aa	Known RBP	11.42	□□□□□ -0.58
MEP3	YPR138C	YPR204W	Q08995	1032 aa		11.42	□□□□□ -0.58
MEP3	YPR138C	ARG8	P18544	423 aa		11.41	□□□□□ -0.58
MEP3	YPR138C	UBP1	P25037	809 aa		11.41	□□□□□ -0.58
MEP3	YPR138C	BUD31	P25337	157 aa	Predicted RBP	11.41	□□□□□ -0.58
MEP3	YPR138C	SPO1	P53541	631 aa		11.41	□□□□□ -0.58
MEP3	YPR138C	HGH1	P48362	394 aa	Known RBP	11.4	□□□□□ -0.58
MEP3	YPR138C	VPS64	Q03944	604 aa		11.4	□□□□□ -0.58
MEP3	YPR138C	YLR271W	Q06152	274 aa		11.4	□□□□□ -0.58
MEP3	YPR138C	GRE2	Q12068	342 aa	Known RBP	11.4	□□□□□ -0.58
MEP3	YPR138C	GCD7	P32502	381 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms