RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C RSF2P46974 1380 aa3.67□□□□□ -1.82
ATG11YPR049C TRP5P00931 707 aaKnown RBP3.66□□□□□ -1.82
ATG11YPR049C BMT6Q12291 365 aa3.66□□□□□ -1.82
ATG11YPR049C PBS2P08018 668 aa3.66□□□□□ -1.82
ATG11YPR049C PML39Q03760 334 aa3.66□□□□□ -1.82
ATG11YPR049C MSB4Q12317 492 aa3.66□□□□□ -1.82
ATG11YPR049C APP1P53933 587 aa3.66□□□□□ -1.82
ATG11YPR049C YEL023CP39992 682 aa3.65□□□□□ -1.83
ATG11YPR049C ADE6P38972 1358 aaKnown RBP3.65□□□□□ -1.83
ATG11YPR049C YNL035CP53962 389 aaKnown RBP3.65□□□□□ -1.83
ATG11YPR049C RAV1P47104 1357 aa3.64□□□□□ -1.83
ATG11YPR049C YNR029CP53729 429 aaKnown RBP3.64□□□□□ -1.83
ATG11YPR049C PAT1P25644 796 aaKnown RBP3.64□□□□□ -1.83
ATG11YPR049C GCD11P32481 527 aaKnown RBP3.64□□□□□ -1.83
ATG11YPR049C VNX1P42839 908 aa3.64□□□□□ -1.83
ATG11YPR049C GYP1Q08484 637 aa3.63□□□□□ -1.83
ATG11YPR049C ENV9Q08651 330 aa3.63□□□□□ -1.83
ATG11YPR049C IMH1Q06704 911 aaKnown RBP3.62□□□□□ -1.83
ATG11YPR049C HKR1P41809 1802 aa3.62□□□□□ -1.83
ATG11YPR049C EDS1P38073 919 aa3.62□□□□□ -1.83
ATG11YPR049C JIP4Q03361 876 aa3.61□□□□□ -1.83
ATG11YPR049C GLC3P32775 704 aa3.61□□□□□ -1.83
ATG11YPR049C YDL129WQ07555 291 aa3.6□□□□□ -1.83
ATG11YPR049C CTH1P47976 325 aa3.6□□□□□ -1.83
ATG11YPR049C KRE5P22023 1365 aa3.6□□□□□ -1.83
ATG11YPR049C FAS2P19097 1887 aaKnown RBP3.59□□□□□ -1.83
ATG11YPR049C PSK1P31374 1356 aa3.59□□□□□ -1.83
ATG11YPR049C TUM1Q08686 304 aaKnown RBP3.59□□□□□ -1.84
ATG11YPR049C YRR1Q12172 810 aa3.59□□□□□ -1.84
ATG11YPR049C ENT1Q12518 454 aa3.59□□□□□ -1.84
ATG11YPR049C YBL086CP38177 466 aa3.57□□□□□ -1.84
ATG11YPR049C NPR2P39923 615 aa3.57□□□□□ -1.84
ATG11YPR049C PTC2P39966 464 aaKnown RBP3.57□□□□□ -1.84
ATG11YPR049C RRD1P40454 393 aaKnown RBP3.57□□□□□ -1.84
ATG11YPR049C RAD9P14737 1309 aa3.57□□□□□ -1.84
ATG11YPR049C YLR419WQ06698 1435 aaKnown RBP3.57□□□□□ -1.84
ATG11YPR049C BRL1P38770 471 aa3.56□□□□□ -1.84
ATG11YPR049C MAK21Q12176 1025 aaKnown RBP3.56□□□□□ -1.84
ATG11YPR049C MID1P41821 548 aa3.56□□□□□ -1.84
ATG11YPR049C PTC4P38089 393 aa3.55□□□□□ -1.84
ATG11YPR049C RPN1P38764 993 aaKnown RBP3.55□□□□□ -1.84
ATG11YPR049C YPR109WQ06104 294 aa3.55□□□□□ -1.84
ATG11YPR049C ARG8P18544 423 aa3.54□□□□□ -1.84
ATG11YPR049C SPT16P32558 1035 aaKnown RBP3.54□□□□□ -1.84
ATG11YPR049C PUS5Q06244 254 aa3.54□□□□□ -1.84
ATG11YPR049C TEA1P47988 759 aa3.54□□□□□ -1.84
ATG11YPR049C YGR273CP53329 174 aa3.54□□□□□ -1.84
ATG11YPR049C UBP1P25037 809 aa3.54□□□□□ -1.84
ATG11YPR049C KEX1P09620 729 aa3.53□□□□□ -1.84
ATG11YPR049C RTC1Q08281 1341 aa3.53□□□□□ -1.85
ATG11YPR049C ERG12P07277 443 aa3.52□□□□□ -1.85
ATG11YPR049C SSA2P10592 639 aaKnown RBP3.52□□□□□ -1.85
ATG11YPR049C FOX2Q02207 900 aaKnown RBP3.52□□□□□ -1.85
ATG11YPR049C CDC73Q06697 393 aa3.52□□□□□ -1.85
ATG11YPR049C YBL036CP38197 257 aa3.52□□□□□ -1.85
ATG11YPR049C DAN4P47179 1161 aa3.52□□□□□ -1.85
ATG11YPR049C YEF3P16521 1044 aaKnown RBP3.52□□□□□ -1.85
ATG11YPR049C PRP43P53131 767 aaKnown RBP3.52□□□□□ -1.85
ATG11YPR049C PKH3Q03306 898 aaPredicted RBP3.52□□□□□ -1.85
ATG11YPR049C MHP1P43638 1398 aa3.51□□□□□ -1.85
ATG11YPR049C GSC2P40989 1895 aa3.51□□□□□ -1.85
ATG11YPR049C DPL1Q05567 589 aa3.51□□□□□ -1.85
ATG11YPR049C NSR1P27476 414 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
ATG11YPR049C SEC61P32915 480 aa3.51□□□□□ -1.85
ATG11YPR049C SAM3Q08986 587 aa3.51□□□□□ -1.85
ATG11YPR049C SPT7P35177 1332 aa3.51□□□□□ -1.85
ATG11YPR049C SLY41P22215 453 aa3.5□□□□□ -1.85
ATG11YPR049C KIP2P28743 706 aa3.5□□□□□ -1.85
ATG11YPR049C DOT5P40553 215 aa3.5□□□□□ -1.85
ATG11YPR049C NMA111P53920 997 aa3.5□□□□□ -1.85
ATG11YPR049C SIR4P11978 1358 aa3.49□□□□□ -1.85
ATG11YPR049C YKR075CP36155 307 aa3.49□□□□□ -1.85
ATG11YPR049C UGA2P38067 497 aa3.49□□□□□ -1.85
ATG11YPR049C CLB5P30283 435 aa3.49□□□□□ -1.85
ATG11YPR049C HAP5Q02516 242 aa3.49□□□□□ -1.85
ATG11YPR049C ALD2P47771 506 aa3.49□□□□□ -1.85
ATG11YPR049C FRK1Q03002 865 aaPredicted RBP3.49□□□□□ -1.85
ATG11YPR049C CSC1Q06538 782 aa3.49□□□□□ -1.85
ATG11YPR049C ISU2Q12056 156 aa3.49□□□□□ -1.85
ATG11YPR049C YEL077CQ3E7X8 1277 aa3.49□□□□□ -1.85
ATG11YPR049C UBP14P38237 781 aaKnown RBP3.48□□□□□ -1.85
ATG11YPR049C NOP53Q12080 455 aaKnown RBP3.48□□□□□ -1.85
ATG11YPR049C SRF1Q12516 437 aa3.48□□□□□ -1.85
ATG11YPR049C KIN1P13185 1064 aa3.48□□□□□ -1.85
ATG11YPR049C SPT23P35210 1082 aa3.47□□□□□ -1.85
ATG11YPR049C KXD1P53158 218 aa3.47□□□□□ -1.85
ATG11YPR049C CPS1P27614 576 aa3.47□□□□□ -1.85
ATG11YPR049C CSN12P47130 423 aa3.47□□□□□ -1.85
ATG11YPR049C VRP1P37370 817 aa3.46□□□□□ -1.86
ATG11YPR049C RIA1P53893 1110 aa3.46□□□□□ -1.86
ATG11YPR049C BUD21Q08492 214 aaPredicted RBP3.46□□□□□ -1.86
ATG11YPR049C MMP1Q12372 583 aa3.46□□□□□ -1.86
ATG11YPR049C PMD1P32634 1753 aa3.46□□□□□ -1.86
ATG11YPR049C NUD1P32336 851 aa3.45□□□□□ -1.86
ATG11YPR049C TOS1P38288 455 aa3.45□□□□□ -1.86
ATG11YPR049C YJL007CP47080 104 aa3.45□□□□□ -1.86
ATG11YPR049C MPC54Q08550 464 aa3.45□□□□□ -1.86
ATG11YPR049C YLR326WQ06170 240 aaKnown RBP3.45□□□□□ -1.86
ATG11YPR049C MLP1Q02455 1875 aaKnown RBP3.45□□□□□ -1.86
ATG11YPR049C MPH3P0CE00 602 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms