RNA–Protein interactions for RNA: YHR089C

GAR1, Transcript of Protein component of the H/ACA snoRNP pseudouridylase complex, yeastyeast

Gene GAR1, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAR1YHR089C ATG13Q06628 738 aa18.03■□□□□ 0.48
GAR1YHR089C AOS1Q06624 347 aa18.02■□□□□ 0.48
GAR1YHR089C MPP10P47083 593 aaKnown RBP17.97■□□□□ 0.47
GAR1YHR089C YDL144CQ07589 356 aa17.97■□□□□ 0.47
GAR1YHR089C YNL050CP53952 270 aa17.96■□□□□ 0.47
GAR1YHR089C LYS4P49367 693 aaPredicted RBP17.94■□□□□ 0.46
GAR1YHR089C THI22Q06490 572 aa17.94■□□□□ 0.46
GAR1YHR089C RPP0P05317 312 aaKnown RBP17.92■□□□□ 0.46
GAR1YHR089C KCC4P25389 1037 aa17.91■□□□□ 0.46
GAR1YHR089C YBP2P53169 641 aa17.91■□□□□ 0.46
GAR1YHR089C RIM15P43565 1770 aa17.91■□□□□ 0.46
GAR1YHR089C GRX1P25373 110 aaKnown RBP17.9■□□□□ 0.46
GAR1YHR089C GTT3P39996 337 aa17.89■□□□□ 0.45
GAR1YHR089C MSB4Q12317 492 aa17.89■□□□□ 0.45
GAR1YHR089C UGA3P26370 528 aa17.86■□□□□ 0.45
GAR1YHR089C YBL086CP38177 466 aa17.85■□□□□ 0.45
GAR1YHR089C RTT109Q07794 436 aa17.85■□□□□ 0.45
GAR1YHR089C MAM1P40065 302 aa17.84■□□□□ 0.45
GAR1YHR089C CTH1P47976 325 aa17.84■□□□□ 0.45
GAR1YHR089C ZDS1P50111 915 aaKnown RBP17.84■□□□□ 0.45
GAR1YHR089C HEF3P53978 1044 aaKnown RBP17.84■□□□□ 0.45
GAR1YHR089C TUM1Q08686 304 aaKnown RBP17.84■□□□□ 0.45
GAR1YHR089C VPS27P40343 622 aaKnown RBP17.83■□□□□ 0.44
GAR1YHR089C SAP155P43612 1002 aa17.83■□□□□ 0.44
GAR1YHR089C ALD2P47771 506 aa17.83■□□□□ 0.44
GAR1YHR089C RAD4P14736 754 aa17.82■□□□□ 0.44
GAR1YHR089C NSE3Q05541 303 aa17.82■□□□□ 0.44
GAR1YHR089C TPD3P31383 635 aa17.81■□□□□ 0.44
GAR1YHR089C RMT2Q03305 412 aa17.81■□□□□ 0.44
GAR1YHR089C ALE1Q08548 619 aa17.8■□□□□ 0.44
GAR1YHR089C SUI2P20459 304 aaKnown RBP17.79■□□□□ 0.44
GAR1YHR089C GRE2Q12068 342 aaKnown RBP17.79■□□□□ 0.44
GAR1YHR089C UGA2P38067 497 aa17.78■□□□□ 0.44
GAR1YHR089C CDC45Q08032 650 aa17.78■□□□□ 0.44
GAR1YHR089C SSA2P10592 639 aaKnown RBP17.77■□□□□ 0.44
GAR1YHR089C BDF1P35817 686 aa17.77■□□□□ 0.44
GAR1YHR089C GYP7P48365 746 aa17.77■□□□□ 0.44
GAR1YHR089C LYS2P07702 1392 aa17.77■□□□□ 0.43
GAR1YHR089C RRT14P40470 206 aa17.76■□□□□ 0.43
GAR1YHR089C NSR1P27476 414 aaKnown RBP RIP-Chip data17.75■□□□□ 0.43not detected
GAR1YHR089C PRS1P32895 427 aaKnown RBP17.75■□□□□ 0.43
GAR1YHR089C BMS1Q08965 1183 aaKnown RBP17.75■□□□□ 0.43
GAR1YHR089C NOP53Q12080 455 aaKnown RBP17.75■□□□□ 0.43
GAR1YHR089C COQ4O13525 335 aa17.73■□□□□ 0.43
GAR1YHR089C BUG1Q12191 341 aa17.72■□□□□ 0.43
GAR1YHR089C MDG1P53885 366 aa17.7■□□□□ 0.42
GAR1YHR089C RPG1P38249 964 aaKnown RBP17.69■□□□□ 0.42
GAR1YHR089C UTP22P53254 1237 aaPredicted RBP17.68■□□□□ 0.42
GAR1YHR089C PHM7Q12252 991 aa17.68■□□□□ 0.42
GAR1YHR089C RVB2Q12464 471 aaKnown RBP17.68■□□□□ 0.42
GAR1YHR089C YFR016CP43597 1233 aaKnown RBP17.67■□□□□ 0.42
GAR1YHR089C ALD3P54114 506 aa17.67■□□□□ 0.42
GAR1YHR089C SSP2Q08646 371 aa17.67■□□□□ 0.42
GAR1YHR089C YBR287WP38355 427 aa17.66■□□□□ 0.42
GAR1YHR089C NYV1Q12255 253 aa17.66■□□□□ 0.42
GAR1YHR089C YRB30P53107 440 aaPredicted RBP17.65■□□□□ 0.42
GAR1YHR089C SRT1Q03175 343 aa17.65■□□□□ 0.42
GAR1YHR089C YOL057WQ08225 711 aa17.65■□□□□ 0.42
GAR1YHR089C TEA1P47988 759 aa17.63■□□□□ 0.41
GAR1YHR089C BUD27P43573 796 aaKnown RBP RIP-Chip data17.62■□□□□ 0.41not detected
GAR1YHR089C TOS1P38288 455 aa17.61■□□□□ 0.41
GAR1YHR089C ARG8P18544 423 aa17.58■□□□□ 0.4
GAR1YHR089C ZDS2P54786 942 aa17.58■□□□□ 0.4
GAR1YHR089C NAB6Q03735 1134 aaKnown RBP RIP-Chip data17.58■□□□□ 0.4not detected
GAR1YHR089C YPR204WQ08995 1032 aa17.56■□□□□ 0.4
GAR1YHR089C SER1P33330 395 aaKnown RBP17.55■□□□□ 0.4
GAR1YHR089C APL2P36000 726 aaPredicted RBP17.54■□□□□ 0.4
GAR1YHR089C YDR306CQ06640 478 aa17.54■□□□□ 0.4
GAR1YHR089C UTP10P42945 1769 aaKnown RBP17.53■□□□□ 0.4
GAR1YHR089C DCD1P06773 312 aa17.53■□□□□ 0.4
GAR1YHR089C DNM1P54861 757 aa17.53■□□□□ 0.4
GAR1YHR089C MAK21Q12176 1025 aaKnown RBP17.53■□□□□ 0.4
GAR1YHR089C YGL082WP53155 381 aa17.52■□□□□ 0.4
GAR1YHR089C VPS64Q03944 604 aa17.51■□□□□ 0.39
GAR1YHR089C HPC2Q01448 625 aa17.5■□□□□ 0.39
GAR1YHR089C RIX7Q07844 837 aaKnown RBP17.5■□□□□ 0.39
GAR1YHR089C YJR008WP47085 338 aa17.49■□□□□ 0.39
GAR1YHR089C MRP7P12687 371 aa17.48■□□□□ 0.39
GAR1YHR089C CST6P40535 587 aa17.48■□□□□ 0.39
GAR1YHR089C LPD1P09624 499 aaKnown RBP17.47■□□□□ 0.39
GAR1YHR089C YIL092WP40497 633 aa17.47■□□□□ 0.39
GAR1YHR089C YLR271WQ06152 274 aa17.47■□□□□ 0.39
GAR1YHR089C SWI1P09547 1314 aa17.47■□□□□ 0.39
GAR1YHR089C CTI6Q08923 506 aa17.46■□□□□ 0.39
GAR1YHR089C YPP1P46951 817 aa17.45■□□□□ 0.38
GAR1YHR089C RAT1Q02792 1006 aaKnown RBP17.45■□□□□ 0.38
GAR1YHR089C NUP133P36161 1157 aa17.42■□□□□ 0.38
GAR1YHR089C RAD2P07276 1031 aa17.41■□□□□ 0.38
GAR1YHR089C DAL5P15365 543 aa17.41■□□□□ 0.38
GAR1YHR089C YGR122WP53272 402 aa17.4■□□□□ 0.38
GAR1YHR089C SSK22P25390 1331 aaPredicted RBP17.4■□□□□ 0.38
GAR1YHR089C CSI1Q04368 295 aa17.39■□□□□ 0.37
GAR1YHR089C DIB1Q06819 143 aaPredicted RBP17.39■□□□□ 0.37
GAR1YHR089C RAD24P32641 659 aa17.38■□□□□ 0.37
GAR1YHR089C SET1P38827 1080 aaKnown RBP17.38■□□□□ 0.37
GAR1YHR089C NOP8Q08287 484 aaPredicted RBP17.38■□□□□ 0.37
GAR1YHR089C HAT1Q12341 374 aa17.38■□□□□ 0.37
GAR1YHR089C RPS19AP07280 144 aaKnown RBP17.37■□□□□ 0.37
GAR1YHR089C RPS19BP07281 144 aaPredicted RBP17.37■□□□□ 0.37
GAR1YHR089C FUN12P39730 1002 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 5,963 RNA–protein pairs in 6.4 ms