RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	KTR7	P40504	517 aa		4.21	□□□□□ -1.74
CCM1	YGR150C	YJL049W	P47048	450 aa		4.21	□□□□□ -1.74
CCM1	YGR150C	ATG1	P53104	897 aa		4.21	□□□□□ -1.74
CCM1	YGR150C	YGR161W-C	Q3E744	92 aa		4.21	□□□□□ -1.74
CCM1	YGR150C	GAL2	P13181	574 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CCM1	YGR150C	MET4	P32389	672 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	ISW1	P38144	1129 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
CCM1	YGR150C	YJR142W	P47173	342 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	SCY1	P53009	804 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	VPS16	Q03308	798 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	ECM16	Q04217	1267 aa	Known RBP	4.2	□□□□□ -1.74
CCM1	YGR150C	YMR196W	Q04336	1088 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	TMA64	Q04600	565 aa	Known RBP	4.2	□□□□□ -1.74
CCM1	YGR150C	KAR1	P11927	433 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	MNN1	P39106	762 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	ERP2	P39704	215 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	FYV10	P40492	516 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	NUT2	Q06213	157 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	PIN2	Q12057	282 aa		4.2	□□□□□ -1.74
CCM1	YGR150C	ENP1	P38333	483 aa	Known RBP	4.19	□□□□□ -1.74
CCM1	YGR150C	FRT1	Q99332	602 aa		4.19	□□□□□ -1.74
CCM1	YGR150C	MPE1	P35728	441 aa	Known RBP	4.19	□□□□□ -1.74
CCM1	YGR150C	DNM1	P54861	757 aa		4.19	□□□□□ -1.74
CCM1	YGR150C	GIR2	Q03768	265 aa	Predicted RBP	4.19	□□□□□ -1.74
CCM1	YGR150C	CDC53	Q12018	815 aa	Known RBP	4.19	□□□□□ -1.74
CCM1	YGR150C	WRS1	Q12109	432 aa	Known RBP	4.19	□□□□□ -1.74
CCM1	YGR150C	RAD2	P07276	1031 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	UBP12	P39538	1254 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	BOL3	P39724	118 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	MAD1	P40957	749 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	YPP1	P46951	817 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	HIF1	Q12373	385 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	SEC6	P32844	805 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	GRX7	P38068	203 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	RSC30	P38781	883 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	RPT2	P40327	437 aa	Known RBP	4.18	□□□□□ -1.74
CCM1	YGR150C	PUF6	Q04373	656 aa	Known RBP	4.18	□□□□□ -1.74
CCM1	YGR150C	BDF2	Q07442	638 aa		4.18	□□□□□ -1.74
CCM1	YGR150C	MET6	P05694	767 aa	Known RBP	4.17	□□□□□ -1.74
CCM1	YGR150C	MVP1	P40959	511 aa	Known RBP	4.17	□□□□□ -1.74
CCM1	YGR150C	YGR273C	P53329	174 aa		4.17	□□□□□ -1.74
CCM1	YGR150C	CEF1	Q03654	590 aa	Predicted RBP	4.17	□□□□□ -1.74
CCM1	YGR150C	ACF4	P47129	309 aa		4.17	□□□□□ -1.74
CCM1	YGR150C	UTP14	Q04500	899 aa	Known RBP	4.17	□□□□□ -1.74
CCM1	YGR150C	PNP1	Q05788	311 aa		4.17	□□□□□ -1.74
CCM1	YGR150C	YOR131C	Q12486	218 aa		4.17	□□□□□ -1.74
CCM1	YGR150C	NOC2	P39744	710 aa	Known RBP	4.16	□□□□□ -1.74
CCM1	YGR150C	QDR1	P40475	563 aa		4.16	□□□□□ -1.74
CCM1	YGR150C	EMP47	P43555	445 aa		4.16	□□□□□ -1.74
CCM1	YGR150C	RPS0B	P46654	252 aa	Known RBP	4.16	□□□□□ -1.74
CCM1	YGR150C	CLN2	P20438	545 aa		4.16	□□□□□ -1.74
CCM1	YGR150C	PWP2	P25635	923 aa	Known RBP	4.16	□□□□□ -1.74
CCM1	YGR150C	VPS24	P36095	224 aa	Known RBP	4.16	□□□□□ -1.74
CCM1	YGR150C	FUI1	P38196	639 aa		4.16	□□□□□ -1.74
CCM1	YGR150C	YEN1	P40028	759 aa		4.16	□□□□□ -1.74
CCM1	YGR150C	VPS27	P40343	622 aa	Known RBP	4.16	□□□□□ -1.74
CCM1	YGR150C	SPR28	Q04921	423 aa		4.16	□□□□□ -1.74
CCM1	YGR150C	NKP1	Q12493	238 aa		4.16	□□□□□ -1.74
CCM1	YGR150C	GLO3	P38682	493 aa	Known RBP	4.15	□□□□□ -1.74
CCM1	YGR150C	MSH4	P40965	878 aa	Predicted RBP	4.15	□□□□□ -1.74
CCM1	YGR150C	COG4	Q06096	861 aa		4.15	□□□□□ -1.74
CCM1	YGR150C	FUR4	P05316	633 aa	Known RBP	4.15	□□□□□ -1.75
CCM1	YGR150C	MCM2	P29469	868 aa		4.15	□□□□□ -1.75
CCM1	YGR150C	POL5	P39985	1022 aa	Known RBP	4.15	□□□□□ -1.75
CCM1	YGR150C	ATH1	P48016	1211 aa		4.15	□□□□□ -1.75
CCM1	YGR150C	ITC1	P53125	1264 aa		4.15	□□□□□ -1.75
CCM1	YGR150C	NAF1	P53919	492 aa	Known RBP	4.15	□□□□□ -1.75
CCM1	YGR150C	MCM16	Q12262	181 aa		4.15	□□□□□ -1.75
CCM1	YGR150C	MIP1	P15801	1254 aa		4.14	□□□□□ -1.75
CCM1	YGR150C	GUT1	P32190	709 aa		4.14	□□□□□ -1.75
CCM1	YGR150C	MFT1	P33441	392 aa	Known RBP	4.14	□□□□□ -1.75
CCM1	YGR150C	SVL3	Q03088	825 aa	Known RBP	4.14	□□□□□ -1.75
CCM1	YGR150C	THS1	P04801	734 aa	Known RBP	4.14	□□□□□ -1.75
CCM1	YGR150C	SIT4	P20604	311 aa		4.14	□□□□□ -1.75
CCM1	YGR150C	MTO1	P53070	669 aa		4.14	□□□□□ -1.75
CCM1	YGR150C	RMD1	Q03441	430 aa		4.14	□□□□□ -1.75
CCM1	YGR150C	TRX2	P22803	104 aa	Known RBP	4.13	□□□□□ -1.75
CCM1	YGR150C	TAT2	P38967	592 aa		4.13	□□□□□ -1.75
CCM1	YGR150C	NUP82	P40368	713 aa		4.13	□□□□□ -1.75
CCM1	YGR150C	ESF1	Q06344	628 aa	Known RBP	4.13	□□□□□ -1.75
CCM1	YGR150C	RPT1	P33299	467 aa	Known RBP	4.13	□□□□□ -1.75
CCM1	YGR150C	BOI1	P38041	980 aa	Known RBP	4.13	□□□□□ -1.75
CCM1	YGR150C	RTF1	P53064	558 aa		4.13	□□□□□ -1.75
CCM1	YGR150C	SRS2	P12954	1174 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	GAP1	P19145	602 aa	Predicted RBP	4.12	□□□□□ -1.75
CCM1	YGR150C	PHO87	P25360	923 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	RTT106	P40161	455 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	FOL1	P53848	824 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	PPM2	Q08282	695 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	YOR238W	Q08634	303 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	ENV9	Q08651	330 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	GRE2	Q12068	342 aa	Known RBP	4.12	□□□□□ -1.75
CCM1	YGR150C	ROM1	P53046	1155 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	HUL5	P53119	910 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	ESF2	P53743	316 aa	Known RBP	4.12	□□□□□ -1.75
CCM1	YGR150C	PUN1	Q06991	263 aa		4.12	□□□□□ -1.75
CCM1	YGR150C	SPT2	P06843	333 aa	Predicted RBP	4.11	□□□□□ -1.75
CCM1	YGR150C	ISF1	P32488	338 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms