RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W ENO2P00925 437 aaKnown RBP6.09□□□□□ -1.43
CDC4YFL009W DPL1Q05567 589 aa6.09□□□□□ -1.43
CDC4YFL009W ERF2Q06551 359 aa6.09□□□□□ -1.43
CDC4YFL009W EDE1P34216 1381 aa6.08□□□□□ -1.44
CDC4YFL009W PML39Q03760 334 aa6.08□□□□□ -1.44
CDC4YFL009W YRR1Q12172 810 aa6.08□□□□□ -1.44
CDC4YFL009W NOP58Q12499 511 aaKnown RBP6.08□□□□□ -1.44
CDC4YFL009W SSA4P22202 642 aaKnown RBP6.07□□□□□ -1.44
CDC4YFL009W SLX8P40072 274 aa6.07□□□□□ -1.44
CDC4YFL009W ULI1P43604 169 aa6.07□□□□□ -1.44
CDC4YFL009W ENO1P00924 437 aaKnown RBP6.07□□□□□ -1.44
CDC4YFL009W MAK16P10962 306 aaPredicted RBP6.07□□□□□ -1.44
CDC4YFL009W TIF11P38912 153 aaKnown RBP6.07□□□□□ -1.44
CDC4YFL009W RIM21P48565 533 aa6.07□□□□□ -1.44
CDC4YFL009W YML083CQ04526 418 aa6.07□□□□□ -1.44
CDC4YFL009W ARG8P18544 423 aa6.06□□□□□ -1.44
CDC4YFL009W PUP1P25043 261 aa6.06□□□□□ -1.44
CDC4YFL009W CWC22P53333 577 aaKnown RBP6.06□□□□□ -1.44
CDC4YFL009W RVB2Q12464 471 aaKnown RBP6.06□□□□□ -1.44
CDC4YFL009W TY2B-LR1P0C2J3 1770 aa6.06□□□□□ -1.44
CDC4YFL009W TY2B-FP0CX63 1770 aa6.06□□□□□ -1.44
CDC4YFL009W TY2B-GR2P0CX64 1770 aa6.06□□□□□ -1.44
CDC4YFL009W TY2B-CP25384 1770 aa6.06□□□□□ -1.44
CDC4YFL009W TY2B-DR2Q03494 1770 aa6.06□□□□□ -1.44
CDC4YFL009W TY1B-DR1Q03855 1755 aa6.06□□□□□ -1.44
CDC4YFL009W TY2B-DR3Q07791 1770 aaKnown RBP6.06□□□□□ -1.44
CDC4YFL009W TY2B-OR1Q12113 1770 aa6.06□□□□□ -1.44
CDC4YFL009W TY2B-DR1Q12472 1770 aa6.06□□□□□ -1.44
CDC4YFL009W TY2B-OR2Q12501 1770 aa6.06□□□□□ -1.44
CDC4YFL009W NOT3P06102 836 aaKnown RBP6.05□□□□□ -1.44
CDC4YFL009W CDC45Q08032 650 aa6.05□□□□□ -1.44
CDC4YFL009W ESC1Q03661 1658 aaKnown RBP6.05□□□□□ -1.44
CDC4YFL009W PDR5P33302 1511 aaKnown RBP6.05□□□□□ -1.44
CDC4YFL009W RDS2P19541 446 aaKnown RBP6.05□□□□□ -1.44
CDC4YFL009W SLY41P22215 453 aa6.05□□□□□ -1.44
CDC4YFL009W VPS27P40343 622 aaKnown RBP6.05□□□□□ -1.44
CDC4YFL009W YDR344CQ05510 147 aa6.05□□□□□ -1.44
CDC4YFL009W GCN2P15442 1659 aa6.04□□□□□ -1.44
CDC4YFL009W RPP0P05317 312 aaKnown RBP6.04□□□□□ -1.44
CDC4YFL009W RPP1BP10622 106 aaKnown RBP6.04□□□□□ -1.44
CDC4YFL009W RPL34BP40525 121 aaKnown RBP6.04□□□□□ -1.44
CDC4YFL009W DJP1P40564 432 aa6.04□□□□□ -1.44
CDC4YFL009W YNL115CP53925 644 aa6.04□□□□□ -1.44
CDC4YFL009W SLN1P39928 1220 aaPredicted RBP6.04□□□□□ -1.44
CDC4YFL009W RTF1P53064 558 aa6.04□□□□□ -1.44
CDC4YFL009W RNA1P11745 407 aaKnown RBP6.03□□□□□ -1.44
CDC4YFL009W KEX2P13134 814 aa6.03□□□□□ -1.44
CDC4YFL009W TRM1P15565 570 aaKnown RBP6.03□□□□□ -1.44
CDC4YFL009W DEF1P35732 738 aaKnown RBP6.03□□□□□ -1.44
CDC4YFL009W PEX21P50091 288 aa6.03□□□□□ -1.44
CDC4YFL009W YRB30P53107 440 aaPredicted RBP6.03□□□□□ -1.44
CDC4YFL009W PEX29Q03370 554 aa6.03□□□□□ -1.44
CDC4YFL009W GEA2P39993 1459 aaKnown RBP6.03□□□□□ -1.44
CDC4YFL009W YBT1P32386 1661 aa6.03□□□□□ -1.44
CDC4YFL009W NMA111P53920 997 aa6.03□□□□□ -1.44
CDC4YFL009W YNL035CP53962 389 aaKnown RBP6.03□□□□□ -1.44
CDC4YFL009W AGE1Q04412 482 aa6.03□□□□□ -1.44
CDC4YFL009W TY2B-BQ12491 1770 aa6.02□□□□□ -1.45
CDC4YFL009W PDR1P12383 1068 aa6.02□□□□□ -1.45
CDC4YFL009W ISU2Q12056 156 aa6.02□□□□□ -1.45
CDC4YFL009W PEP12P32854 288 aa6.02□□□□□ -1.45
CDC4YFL009W FPR4Q06205 392 aaPredicted RBP6.02□□□□□ -1.45
CDC4YFL009W LAM6Q08001 693 aa6.02□□□□□ -1.45
CDC4YFL009W SNT2P53127 1403 aa6.01□□□□□ -1.45
CDC4YFL009W PCT1P13259 424 aa6.01□□□□□ -1.45
CDC4YFL009W STR2P47164 639 aa6.01□□□□□ -1.45
CDC4YFL009W ENV11P53246 860 aa6.01□□□□□ -1.45
CDC4YFL009W TY1A-DR4O74302 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-HP0C2I4 478 aaKnown RBP6□□□□□ -1.45
CDC4YFL009W TY1A-AP0CX57 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-PR1P0CX58 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-ORP0CX59 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-PR2P0CX60 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-DR5P0CX65 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-ER2P0CX66 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-GR3P0CX67 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-LR1P0CX68 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-MR2P0CX69 440 aa6□□□□□ -1.45
CDC4YFL009W NUD1P32336 851 aa6□□□□□ -1.45
CDC4YFL009W SMC3P47037 1230 aa6□□□□□ -1.45
CDC4YFL009W TY1A-JR2P47099 440 aa6□□□□□ -1.45
CDC4YFL009W CTR9P89105 1077 aa6□□□□□ -1.45
CDC4YFL009W TY1A-DR1Q03856 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-ML1Q04706 440 aaKnown RBP6□□□□□ -1.45
CDC4YFL009W TY1A-BRQ12217 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-NL2Q12470 440 aa6□□□□□ -1.45
CDC4YFL009W TY1A-GR2Q12485 440 aa6□□□□□ -1.45
CDC4YFL009W SEC2P17065 759 aa6□□□□□ -1.45
CDC4YFL009W SPT5P27692 1063 aaKnown RBP6□□□□□ -1.45
CDC4YFL009W VPS24P36095 224 aaKnown RBP6□□□□□ -1.45
CDC4YFL009W SPC110P32380 944 aa5.99□□□□□ -1.45
CDC4YFL009W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
CDC4YFL009W SPP1Q03012 353 aa5.99□□□□□ -1.45
CDC4YFL009W CHZ1P40019 153 aaPredicted RBP5.99□□□□□ -1.45
CDC4YFL009W LDB19Q12502 818 aa5.99□□□□□ -1.45
CDC4YFL009W CAT8P39113 1433 aa5.99□□□□□ -1.45
CDC4YFL009W VTH1P40438 1549 aa5.98□□□□□ -1.45
CDC4YFL009W VTH2P40890 1549 aa5.98□□□□□ -1.45
CDC4YFL009W RAM1P22007 431 aa5.98□□□□□ -1.45
CDC4YFL009W NAP1P25293 417 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms