RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W TY1B-DR1Q03855 1755 aa8.83□□□□□ -1
YRF1-1YDR545W TY2B-DR3Q07791 1770 aaKnown RBP8.83□□□□□ -1
YRF1-1YDR545W TY2B-OR1Q12113 1770 aa8.83□□□□□ -1
YRF1-1YDR545W TY2B-DR1Q12472 1770 aa8.83□□□□□ -1
YRF1-1YDR545W TY2B-OR2Q12501 1770 aa8.83□□□□□ -1
YRF1-1YDR545W PSH1Q12161 406 aa8.83□□□□□ -1
YRF1-1YDR545W CWH41P53008 833 aa8.83□□□□□ -1
YRF1-1YDR545W SIR4P11978 1358 aa8.82□□□□□ -1
YRF1-1YDR545W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
YRF1-1YDR545W RTT109Q07794 436 aa8.82□□□□□ -1
YRF1-1YDR545W MDM38Q08179 573 aa8.82□□□□□ -1
YRF1-1YDR545W PEX19Q07418 342 aa8.82□□□□□ -1
YRF1-1YDR545W PUS1Q12211 544 aaKnown RBP8.82□□□□□ -1
YRF1-1YDR545W PDR11P40550 1411 aa8.82□□□□□ -1
YRF1-1YDR545W MNR2P35724 969 aa8.82□□□□□ -1
YRF1-1YDR545W NPA3P47122 385 aa8.82□□□□□ -1
YRF1-1YDR545W SPO1P53541 631 aa8.82□□□□□ -1
YRF1-1YDR545W ARP5P53946 755 aa8.81□□□□□ -1
YRF1-1YDR545W HSP104P31539 908 aaKnown RBP8.81□□□□□ -1
YRF1-1YDR545W CCT5P40413 562 aaKnown RBP8.81□□□□□ -1
YRF1-1YDR545W CIR1P42940 261 aa8.81□□□□□ -1
YRF1-1YDR545W BBC1P47068 1157 aa8.81□□□□□ -1
YRF1-1YDR545W TLG2Q08144 397 aa8.81□□□□□ -1
YRF1-1YDR545W YRF1-4O13559 1382 aa8.81□□□□□ -1
YRF1-1YDR545W YML133CQ03099 1374 aa8.81□□□□□ -1
YRF1-1YDR545W YLL067CQ07888 1374 aa8.81□□□□□ -1
YRF1-1YDR545W YLL066CQ99208 1374 aa8.81□□□□□ -1
YRF1-1YDR545W BRN1P38170 754 aa8.81□□□□□ -1
YRF1-1YDR545W VPS41P38959 992 aa8.81□□□□□ -1
YRF1-1YDR545W RUD3Q12234 484 aaKnown RBP8.81□□□□□ -1
YRF1-1YDR545W GYP7P48365 746 aa8.8□□□□□ -1
YRF1-1YDR545W RPL19AP0CX82 189 aaKnown RBP8.8□□□□□ -1
YRF1-1YDR545W RPL19BP0CX83 189 aaPredicted RBP8.8□□□□□ -1
YRF1-1YDR545W CDC25P04821 1589 aa8.8□□□□□ -1
YRF1-1YDR545W SWH1P35845 1188 aa8.8□□□□□ -1
YRF1-1YDR545W GRX4P32642 244 aa8.8□□□□□ -1
YRF1-1YDR545W PET123P17558 318 aa8.79□□□□□ -1
YRF1-1YDR545W MRX12P47084 519 aa8.79□□□□□ -1
YRF1-1YDR545W TY2B-BQ12491 1770 aa8.79□□□□□ -1
YRF1-1YDR545W TTI1P36097 1038 aa8.79□□□□□ -1
YRF1-1YDR545W HRQ1Q05549 1077 aa8.79□□□□□ -1
YRF1-1YDR545W YBR287WP38355 427 aa8.79□□□□□ -1
YRF1-1YDR545W ECM1P39715 212 aa8.79□□□□□ -1
YRF1-1YDR545W BUD3P25558 1636 aa8.79□□□□□ -1
YRF1-1YDR545W DNF2Q12675 1612 aa8.78□□□□□ -1
YRF1-1YDR545W CAJ1P39101 391 aa8.78□□□□□ -1
YRF1-1YDR545W TFG2P41896 400 aaPredicted RBP8.78□□□□□ -1
YRF1-1YDR545W RBA50Q04418 439 aa8.78□□□□□ -1
YRF1-1YDR545W YGL140CP53120 1219 aa8.78□□□□□ -1
YRF1-1YDR545W MSB4Q12317 492 aa8.78□□□□□ -1
YRF1-1YDR545W PSK1P31374 1356 aa8.78□□□□□ -1
YRF1-1YDR545W MSH3P25336 1018 aa8.78□□□□□ -1
YRF1-1YDR545W ZUO1P32527 433 aaKnown RBP8.78□□□□□ -1
YRF1-1YDR545W RRT14P40470 206 aa8.78□□□□□ -1
YRF1-1YDR545W HYR1P40581 163 aaKnown RBP8.78□□□□□ -1
YRF1-1YDR545W TAN1P53072 289 aaPredicted RBP8.78□□□□□ -1
YRF1-1YDR545W OMS1Q06668 471 aa8.78□□□□□ -1
YRF1-1YDR545W ZDS1P50111 915 aaKnown RBP8.77□□□□□ -1
YRF1-1YDR545W KRE33P53914 1056 aaKnown RBP8.77□□□□□ -1.01
YRF1-1YDR545W SNF2P22082 1703 aa8.77□□□□□ -1.01
YRF1-1YDR545W YSP2Q06681 1438 aa8.77□□□□□ -1.01
YRF1-1YDR545W ALD4P46367 519 aaKnown RBP8.77□□□□□ -1.01
YRF1-1YDR545W HEF3P53978 1044 aaKnown RBP8.77□□□□□ -1.01
YRF1-1YDR545W ROM2P51862 1356 aaKnown RBP8.76□□□□□ -1.01
YRF1-1YDR545W YAP3P38749 330 aa8.76□□□□□ -1.01
YRF1-1YDR545W DIP2Q12220 943 aaPredicted RBP8.76□□□□□ -1.01
YRF1-1YDR545W SWI3P32591 825 aa8.76□□□□□ -1.01
YRF1-1YDR545W MED8P38304 223 aa8.76□□□□□ -1.01
YRF1-1YDR545W HXT13P39924 564 aa8.76□□□□□ -1.01
YRF1-1YDR545W YCG1Q06680 1035 aa8.76□□□□□ -1.01
YRF1-1YDR545W NCB2Q92317 146 aa8.76□□□□□ -1.01
YRF1-1YDR545W RRP46P53256 223 aaPredicted RBP8.75□□□□□ -1.01
YRF1-1YDR545W RRM3P38766 723 aa8.75□□□□□ -1.01
YRF1-1YDR545W RIO2P40160 425 aaKnown RBP8.75□□□□□ -1.01
YRF1-1YDR545W TAP42Q04372 366 aa8.74□□□□□ -1.01
YRF1-1YDR545W CAB1Q04430 367 aa8.74□□□□□ -1.01
YRF1-1YDR545W VPS30Q02948 557 aa8.74□□□□□ -1.01
YRF1-1YDR545W SWI1P09547 1314 aa8.74□□□□□ -1.01
YRF1-1YDR545W MLP1Q02455 1875 aaKnown RBP8.73□□□□□ -1.01
YRF1-1YDR545W YOR093CQ12275 1648 aa8.73□□□□□ -1.01
YRF1-1YDR545W NOC2P39744 710 aaKnown RBP8.73□□□□□ -1.01
YRF1-1YDR545W CDC11P32458 415 aa8.73□□□□□ -1.01
YRF1-1YDR545W SPT8P38915 602 aa8.73□□□□□ -1.01
YRF1-1YDR545W TRS33Q99394 268 aa8.73□□□□□ -1.01
YRF1-1YDR545W MAM1P40065 302 aa8.73□□□□□ -1.01
YRF1-1YDR545W TOP1P04786 769 aa8.73□□□□□ -1.01
YRF1-1YDR545W PRX1P34227 261 aaKnown RBP8.72□□□□□ -1.01
YRF1-1YDR545W PLP2Q12017 286 aa8.72□□□□□ -1.01
YRF1-1YDR545W PDR12Q02785 1511 aa8.72□□□□□ -1.01
YRF1-1YDR545W PET111P08468 800 aa8.72□□□□□ -1.01
YRF1-1YDR545W PSE1P32337 1089 aaKnown RBP8.72□□□□□ -1.01
YRF1-1YDR545W ARD1P07347 238 aaPredicted RBP8.72□□□□□ -1.01
YRF1-1YDR545W NPR3P38742 1146 aa8.72□□□□□ -1.01
YRF1-1YDR545W CSI1Q04368 295 aa8.72□□□□□ -1.01
YRF1-1YDR545W LYS2P07702 1392 aa8.72□□□□□ -1.01
YRF1-1YDR545W NDC80P40460 691 aa8.72□□□□□ -1.01
YRF1-1YDR545W HOS4P40480 1083 aa8.72□□□□□ -1.01
YRF1-1YDR545W YNL011CP53980 444 aa8.72□□□□□ -1.01
YRF1-1YDR545W UBP10P53874 792 aaPredicted RBP8.72□□□□□ -1.01
YRF1-1YDR545W VMS1Q04311 632 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms